Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq6689 95.1 2e-14 seq13 95.1 2e-14 >seq6689 Length=433 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 || || || ||||| ||||||||| || ||| |||||||||| || |||||||||||| Sbjct 171 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 230 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || |||||||| ||| | || |||||||| || |||| | | | || || || Sbjct 231 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGAC 290 Query 196869 TTCGTCTGGACGGGCGGCGA 196888 ||||| ||||| || ||||| Sbjct 291 TTCGTGTGGACCGGAGGCGA 310 >seq13 Length=283376 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 || || || ||||| ||||||||| || ||| |||||||||| || |||||||||||| Sbjct 138812 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 138871 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || |||||||| ||| | || |||||||| || |||| | | | || || || Sbjct 138872 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGAC 138931 Query 196869 TTCGTCTGGACGGGCGGCGA 196888 ||||| ||||| || ||||| Sbjct 138932 TTCGTGTGGACCGGAGGCGA 138951 Score = 84.2 bits (92), Expect = 3e-11 Identities = 164/240 (68%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| || || |||||||| | | ||||| ||| | || || ||||| ||| Sbjct 138395 GACCGCACGGGGACGGGCACGCGCAGCGTGTTCGGCCGCCAGCTCCGCTTCGACCT-CGC 138453 Query 196131 AAAGGG-TTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACT 196189 |||| |||||||| |||| || || ||||||| || || | |||| || Sbjct 138454 GCAGGGCTTCCCGCTCATCACGACGAAGCGCGTGCACCTCAAGTCCGTCGCCTACGAGCT 138513 Query 196190 GTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 196249 | ||||||||||| ||||||| | ||| | | | || | || | ||| | || Sbjct 138514 GCTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAGCGCGGCGTGCGCAT 138573 Query 196250 CTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309 |||||| |||||||| || | || ||||| || |||||||||||||| |||||||| Sbjct 138574 CTGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCCCCGTCTACGGCGTCCAGTGGCG 138633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770215803050720