Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 8e-15 >seq6 Length=371824 Score = 95.1 bits (104), Expect = 8e-15 Identities = 225/330 (68%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 47049 CCACCACAACTACACCGAGAACGT-CACGATCAACGGCGAGAGGGT-GTGGCTGACGCGC 47106 ||||||||||||| || | || |||| || ||||| || | | || | |||| ||| Sbjct 99004 CCACCACAACTACGTCGCGGTCGAGCACG-TCGACGGCCAGGAGCTCGTCG-TGACCCGC 99061 Query 47107 AAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTCCATGGGCACC 47166 ||||| |||||| ||| | ||||| | ||| |||||||| || |||||||||||| Sbjct 99062 AAGGGCGCGATCCGGGCCGGGAAGGGCGACCTCGGGCTCATCCCGGGGTCCATGGGCACC 99121 Query 47167 AAGTCGTACGTCGTTGTGGGGCAGGGGAATTCGTCTGGCCTA-TACTCGGCACCACATGG 47225 |||||| |||| |||| ||||| || | | || | ||||| | || || Sbjct 99122 GGCTCGTACATCGTGCGCGGGCTCGGGAACCCG-GAGTCGTACTGGTCGGCGTCGCACGG 99180 Query 47226 GGCTGGCCGGAACTTCTCTCGCACCGAGGCTCGCAAGCGGTTCACTGCGGACGACCTCGC 47285 || ||||| | | || ||||| |||| ||| ||||| ||||||||||| Sbjct 99181 TGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGACCTCGC 99240 Query 47286 GAAGGCC--ATGGAGGGCATCGAGTACCGCCACGGTGAGGAGTGGATCGACGAGATCCCC 47343 | || | | ||| | |||| |||| | | | | | | ||||||||||||| Sbjct 99241 --CGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATCCCG 99298 Query 47344 GCAGCGTACAAGGACATCGACCAGGTCATC 47373 || || ||||||||| ||||| ||||| || Sbjct 99299 GCCGCCTACAAGGACCTCGACGAGGTCGTC 99328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313874085667764