Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq1 194 6e-45 >seq1 Length=1297082 Score = 194 bits (214), Expect = 6e-45 Identities = 256/348 (74%), Gaps = 8/348 (2%) Strand=Plus/Plus Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957 ||||| ||||| || ||||| |||||||| ||||| ||| || || ||||| || Sbjct 1125010 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 1125069 Query 30958 TTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTC 31017 ||||| || || || || || || ||||||||| | ||| ||| ||||| || ||| Sbjct 1125070 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 1125129 Query 31018 GATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGC-GCTGCTGTCTG 31076 || || ||||| ||||||||||| ||||| || || || ||| ||||| ||| | |||| Sbjct 1125130 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCT-CGATCTG 1125188 Query 31077 GCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATC-TGCG 31135 ||||||| | || ||||| ||||| ||||| ||| |||||||||| |||||| ||| Sbjct 1125189 GCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGC- 1125247 Query 31136 TCGGGCGTCTGAAGTC--GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCAT 31193 || || || ||| |||| |||||||| ||||| ||||||||||| ||| | Sbjct 1125248 AGGGCCGCCT--CGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGT 1125305 Query 31194 CGAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCGATGGGCGTCTGC 31241 |||||| | || ||| ||||| || || ||||| | || ||||| Sbjct 1125306 CGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGC 1125353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163987913608608