Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1435 282 4e-71
seq1933 275 7e-69
seq1897 275 7e-69
seq4547 273 2e-68
seq7520 197 1e-45
seq312 132 5e-26
seq292 132 5e-26
seq9486 127 2e-24
>seq1435
Length=798
Score = 282 bits (312), Expect = 4e-71
Identities = 231/280 (83%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||| || ||| |||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct 230 TCTCGCTTTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTCCG 289
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463
||||| ||||||| || |||||| ||||||||||||| |||||||||||| ||||||||
Sbjct 290 CCTCCTGGGTTCATGCCATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCAT 349
Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATT-----TTTA--GTAGAGAGAGGGTTTCACC 8516
|||||| | ||| ||||||||||| |||| ||||||| |||| ||||
Sbjct 350 GCATCACCACAACCGGCTTATTTTTGTATTTCGTATTTATTGTAGAGAAGGGGTCTCACT 409
Query 8517 ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCC 8576
||||| ||||||||||||| |||||||| |||| ||||||| || |||||| ||||||
Sbjct 410 GTGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCGACCTCCC 469
Query 8577 AAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616
||| |||||||||||||||| |||| ||| ||||||||||
Sbjct 470 AAAATGCTGGGATTACAGGCTTGAGTCACTGCGCCTGGCC 509
>seq1933
Length=624
Score = 275 bits (304), Expect = 7e-69
Identities = 218/259 (84%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 8353 GTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGG 8412
|| ||||||||||| ||||||||| |||||| ||| | |||||||||| |||||||||
Sbjct 470 GTCGCCCAGGCTGGCGTGCAGTGGTACGATCTCAGCTTA-TGCAACCTCCACCTCCCGGG 412
Query 8413 TTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCA 8472
|||||| |||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 411 TTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTACAGGTGTGCACCACCG 352
Query 8473 CGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGG 8532
| | ||||| ||| ||||||| |||||||| || |||||||||||||||||||| |
Sbjct 351 CACTTGGCTAACTTT-GTATTTTCAGTAGAGATGGGATTTCACCATGTTGGCCAGGCCAG 293
Query 8533 TCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTAC 8592
||||||||||||||||||| |||||||||| |||| ||||||| |||||||| ||||||
Sbjct 292 TCTCGAACTCCTGACCTCAAGTGATCCACCCACCTCAGCCTCCCGAAGTGCTGAGATTAC 233
Query 8593 AGGCATGAGCCACCGCGCC 8611
||||||||||||| || ||
Sbjct 232 AGGCATGAGCCACTGCACC 214
>seq1897
Length=630
Score = 275 bits (304), Expect = 7e-69
Identities = 221/264 (84%), Gaps = 7/264 (3%)
Strand=Plus/Minus
Query 8358 CCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAA 8417
||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||
Sbjct 352 CCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCAGGGTTCAA 293
Query 8418 GCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCA 8477
|| |||||||||||||||||||| ||| | | ||||||||||| |||| || | |
Sbjct 292 GCGATTCTCCTGCCTCAGCCTCCCGAGCATCAGGGATTACAGGTGCGCGCCATCATGTCT 233
Query 8478 AGCTAA---TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTG--GCCAGGCTGG 8532
||||| ||||| ||| |||| |||||| ||||||||||||||||| | |||||||
Sbjct 232 GGCTAATTTTTTTTTTATCTTTAATAGAGACAGGGTTTCACCATGTTGGTGAAAGGCTGG 173
Query 8533 TCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTAC 8592
|||| || ||||||||| || |||||||| |||| |||||||||||||||| ||||||
Sbjct 172 TCTCAAAGTCCTGACCT--TGGGATCCACCCACCTCAGCCTCCCAAAGTGCTGTGATTAC 115
Query 8593 AGGCATGAGCCACCGCGCCTGGCC 8616
||||||||||||||| ||||||||
Sbjct 114 AGGCATGAGCCACCGTGCCTGGCC 91
>seq4547
Length=456
Score = 273 bits (302), Expect = 2e-68
Identities = 224/270 (83%), Gaps = 3/270 (1%)
Strand=Plus/Plus
Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408
|||||| |||||||||||||||| ||| ||||| ||||||| ||| | | ||||||
Sbjct 179 CTCTGTCACCCAGGCTGGAGTGCAATGGTTCAATCTCGGCTCACTCCAAGCCCTGCCTCC 238
Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468
|||||| | || |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 239 CGGGTTGATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCC 298
Query 8469 ACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAG 8527
||||| || ||||| ||||||||||||||| ||||| |||||||| |||| | |||
Sbjct 299 ACCACACCCGGCTAATTTTTTGTATTTTTAGCAGAGACCGGGTTTCATAGTGTTAGTCAG 358
Query 8528 GCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGG 8587
| ||||||| | ||||||||||| ||||||| || |||||||| |||||||||||||||
Sbjct 359 GATGGTCTCAATCTCCTGACCTC--GTGATCCGCCCGCCTCGGCTTCCCAAAGTGCTGGG 416
Query 8588 ATTACAGGCATGAGCCACCGCGCCTGGCCC 8617
||||||||| ||||||||| | || ||||
Sbjct 417 ATTACAGGCGTGAGCCACCACTCCCAGCCC 446
>seq7520
Length=428
Score = 197 bits (218), Expect = 1e-45
Identities = 171/210 (81%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
||||||||||| |||||||||| |||||||||| ||||| | |||||||| ||||||
Sbjct 79 TCTCACTCTGTCGCCCAGGCTGTAGTGCAGTGGTGCGATCTTGGGTCACTGCAGCCTCCG 138
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAG--GC 8461
||| || ||||||||| ||||| | || |||||||| ||||||||||| |||||| ||
Sbjct 139 CCTGCCAGGTTCAAGCAATTCTTCCACCCCAGCCTCCCGAGTAGCTGGGGTTACAGGTGC 198
Query 8462 AAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGA-GAGGGTTTCACCATGT 8520
|||| |||| || ||| ||||||| |||||||| | ||||||||||| ||
Sbjct 199 CTGCCCCACGGCGCCTGACTCCATTTCGTATTTTCAGTAGAGACGGGGGTTTCACCACGT 258
Query 8521 TGGCCAGGCTGGTCTCGAACTCCTGACCTC 8550
||||| ||||||||||||||||||||||||
Sbjct 259 TGGCCGGGCTGGTCTCGAACTCCTGACCTC 288
>seq312
Length=16270
Score = 132 bits (146), Expect = 5e-26
Identities = 564/880 (64%), Gaps = 31/880 (4%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| ||||| || || ||| | ||||||| || || |||||||| |
Sbjct 941 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 1000
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319
|| || || |||||||| ||||| || || || || ||| ||| | | |||
Sbjct 1001 CAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 1058
Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379
| | || || || || || || || || |||| ||||| ||| || |||
Sbjct 1059 CCGAAAGCAACC---AACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCA 1115
Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439
||| ||||||| | ||||| | || || | ||| || || ||||||
Sbjct 1116 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 1175
Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496
||||| || | |||| ||| |||||| || || ||| | || ||||
Sbjct 1176 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 1232
Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556
||||| || |||||||| || || | ||||| || |||| |||||||| ||
Sbjct 1233 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 1292
Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616
||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| ||
Sbjct 1293 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 1352
Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676
||||| || || | ||| |||| | |||||||| || || | | |||||| ||
Sbjct 1353 CCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 1412
Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----AT 23732
| | || ||||||| || | ||| | |||||| | || | | ||
Sbjct 1413 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGAT 1468
Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792
|| | ||| || || || | || |||||| | || | || || ||||| ||
Sbjct 1469 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGAT 1528
Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852
| || || ||||||| |||||||||||||| || || || || || ||||
Sbjct 1529 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 1588
Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912
| || || | | ||| || || | | || ||| | | || ||||| ||||||||
Sbjct 1589 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 1648
Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAG 23968
||| ||| ||| || || || |||||||| || ||||| ||| ||| || |
Sbjct 1649 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-G 1706
Query 23969 TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027
|| || | || ||||| |||| ||||| || || ||||||| ||| ||| | |||||
Sbjct 1707 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 1766
Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| || ||||||||| || | |||| || ||||
Sbjct 1767 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 1806
>seq292
Length=18136
Score = 132 bits (146), Expect = 5e-26
Identities = 564/880 (64%), Gaps = 31/880 (4%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| ||||| || || ||| | ||||||| || || |||||||| |
Sbjct 3074 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 3133
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319
|| || || |||||||| ||||| || || || || ||| ||| | | |||
Sbjct 3134 CAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 3191
Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379
| | || || || || || || || || |||| ||||| ||| || |||
Sbjct 3192 CCGAAAGCAACC---AACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCA 3248
Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439
||| ||||||| | ||||| | || || | ||| || || ||||||
Sbjct 3249 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 3308
Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496
||||| || | |||| ||| |||||| || || ||| | || ||||
Sbjct 3309 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 3365
Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556
||||| || |||||||| || || | ||||| || |||| |||||||| ||
Sbjct 3366 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 3425
Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616
||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| ||
Sbjct 3426 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 3485
Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676
||||| || || | ||| |||| | |||||||| || || | | |||||| ||
Sbjct 3486 CCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 3545
Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----AT 23732
| | || ||||||| || | ||| | |||||| | || | | ||
Sbjct 3546 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGAT 3601
Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792
|| | ||| || || || | || |||||| | || | || || ||||| ||
Sbjct 3602 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGAT 3661
Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852
| || || ||||||| |||||||||||||| || || || || || ||||
Sbjct 3662 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 3721
Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912
| || || | | ||| || || | | || ||| | | || ||||| ||||||||
Sbjct 3722 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 3781
Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAG 23968
||| ||| ||| || || || |||||||| || ||||| ||| ||| || |
Sbjct 3782 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-G 3839
Query 23969 TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027
|| || | || ||||| |||| ||||| || || ||||||| ||| ||| | |||||
Sbjct 3840 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 3899
Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| || ||||||||| || | |||| || ||||
Sbjct 3900 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 3939
>seq9486
Length=386
Score = 127 bits (140), Expect = 2e-24
Identities = 114/142 (80%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 8479 GCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGA 8538
||||||||| ||||||||||| ||| | ||| |||| ||| ||||||||||||| |
Sbjct 21 GCTAATTTTGGTATTTTTAGTGAAGACAA--TTTTACCACATTGCCCAGGCTGGTCTCAA 78
Query 8539 ACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCAT 8598
| ||||| |||| ||||||| |||||| | ||||| |||||||| ||||||| | |||
Sbjct 79 AGTCCTGGACTCAAGTGATCCTCCTGCCACAACCTCCTAAAGTGCTAGGATTACGGACAT 138
Query 8599 GAGCCACCGCGCCTGGCCCTTT 8620
|||||||| ||| |||| |||
Sbjct 139 GAGCCACCATGCCCGGCCTTTT 160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521426125448800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |