Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq139 150 1e-31 seq4 123 2e-23 seq7730 114 9e-21 seq189 109 4e-19 seq56 109 4e-19 seq8561 105 5e-18 seq72 95.1 9e-15 >seq139 Length=48224 Score = 150 bits (166), Expect = 1e-31 Identities = 178/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 32489 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 32430 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | |||| || |||||||| |||||||||||||| | ||| |||| Sbjct 32429 GTCAGACAAGGTTCTAC-CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGAT 32371 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281 ||| ||| | ||||||||| ||| || ||| ||| || ||| | || ||||||| | Sbjct 32370 CTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAG 32312 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || || || || || | ||||| || ||||| ||||| Sbjct 32311 GATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32256 Score = 131 bits (144), Expect = 1e-25 Identities = 175/237 (74%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 32717 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 32658 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | |||| ||||| ||||| |||||||| ||||| | || |||| Sbjct 32657 GTCAGACAAGGT-TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGAT 32599 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280 ||| ||| | ||||||||| || || || || || | ||| | || ||||||| Sbjct 32598 CTGGAGGAATACCTTCCTTGTCTTGAATTTTACT--TTTGACGTTGTCAATAGTGTCGGA 32541 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || || || || ||||| |||||||| Sbjct 32540 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32484 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | ||| || || | ||| |||||| || ||||||||||| Sbjct 32258 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 32199 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | |||| || |||||||| |||||||||||||| | || ||||||| Sbjct 32198 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 32139 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||| Sbjct 32138 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 32080 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | || |||| || || || || || || | ||||| ||||| || ||||| || Sbjct 32079 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 32025 >seq4 Length=403504 Score = 123 bits (136), Expect = 2e-23 Identities = 184/258 (71%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||||||||| |||| |||||| || ||||||||||||||| || Sbjct 386767 TTGCATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATA 386708 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || | |||| | | || ||||| ||||| || ||||| |||| | || || Sbjct 386707 GTCTGACAAAGTT--CTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGG 386650 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||||||||| || ||||| ||| | | | || ||||||| | Sbjct 386649 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAG 386590 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || ||||||| ||||| ||||| || || | ||||| ||||| || ||||| || Sbjct 386589 GACTCGACCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATAGTG 386530 Query 44342 --TGAATGAAAATAGCGG 44357 | | | |||| ||||| Sbjct 386529 TCTTATTTAAAAAAGCGG 386512 Score = 123 bits (136), Expect = 2e-23 Identities = 170/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||||||||| |||| |||||| || ||||||||||||||| || Sbjct 386995 TTGCATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATA 386936 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || | | ||| | | || ||||| ||||| || ||||| |||| | || || Sbjct 386935 GTCTGACAAAGTT--CTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGG 386878 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||||||||| || ||||| ||| | | | |||||||| | Sbjct 386877 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAA 386818 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| | || || ||||| || || || ||||| |||||||||||||| Sbjct 386817 GACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386762 Score = 122 bits (134), Expect = 6e-23 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||||||||| |||| |||||| || ||||||||||||||| || || Sbjct 387220 CATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC 387161 Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | | ||| | | || ||||| ||||| || ||||| |||| | || || ||| Sbjct 387160 TGACAAAGTT--CTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCT 387103 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| ||| | | | |||||||| | || Sbjct 387102 GGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGAC 387043 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || || || ||||| |||||||||||||| Sbjct 387042 TCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386990 >seq7730 Length=350 Score = 114 bits (126), Expect = 9e-21 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| || Sbjct 211 CATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTC 152 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | || | | |||| || | |||||| |||||||||||||| | || ||||||| Sbjct 151 AGACAAGGTTCTAC-CGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTG 93 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGAT 44284 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| ||| Sbjct 92 GAGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGAT 34 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGT 44313 || || |||| || || || || || || Sbjct 33 TCAACTTCCAATGTTATGGTTTTACCGGT 5 >seq189 Length=35770 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| || || ||||||||||||||||| |||| Sbjct 27455 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 27514 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 27515 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 27572 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 27573 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 27630 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 27631 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 27681 >seq56 Length=105907 Score = 109 bits (120), Expect = 4e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| ||| | ||| |||||||||||||||||| || | | Sbjct 95181 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 95240 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | || |||| |||| ||||| || ||||||||||| | || || || | || Sbjct 95241 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 95299 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 95300 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATAGTGTCTGAAGATTCA 95357 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 95358 ACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 95407 >seq8561 Length=249 Score = 105 bits (116), Expect = 5e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||| || |||||||| Sbjct 170 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTA 111 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | |||| || |||||||| |||||||||||||| | || ||||| Sbjct 110 ATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATC 51 Query 44224 TGAAGGCACACCTTCCTTTTC 44244 || ||| | ||||||||| || Sbjct 50 TGGAGGGATACCTTCCTTGTC 30 >seq72 Length=89915 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 61337 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 61396 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| |||| ||||| || ||||||||||| | || || || | Sbjct 61397 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 61454 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | |||||||| | || Sbjct 61455 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 61512 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| || |||| || || ||||| || || | ||||| |||||| Sbjct 61513 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 61558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359948754960564