Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq78 98.7 1e-15 seq11 95.1 2e-14 >seq78 Length=82713 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 63731 TAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAG 63790 ||||| || | || || || |||| ||||| |||||||||||| | | |||||| | Sbjct 49957 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 50016 Query 63791 GTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTAC 63850 |||| |||||| | ||||| |||||||||||| |||||| ||| ||||| || | Sbjct 50017 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 50076 Query 63851 CCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 | ||| | | || || || || ||| |||| ||||||||| ||| Sbjct 50077 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGACTGTT 50123 >seq11 Length=290327 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 63752 AAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATTTATC 63811 |||| ||||| ||||| |||||| | | |||||| ||||| |||||| | |||| Sbjct 270684 AAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACATATC 270743 Query 63812 GACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAATCCAC 63871 | |||||||||||| ||||| ||| |||||||| || ||| | | |||||||| | Sbjct 270744 GTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTTCCAGATTTAATTATCAATCCTC 270803 Query 63872 ACGCTTTTCCCAGTCGTATGACCGT 63896 | ||| |||| ||||||||| || Sbjct 270804 ATGCTATTCCATCTCGTATGACTGT 270828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666996051527520