Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq217 127 4e-24 seq42 87.8 4e-12 >seq217 Length=33808 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 9029 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 8970 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 ||||| || |||| | ||||| || || ||||| || || || || || ||||| ||| Sbjct 8969 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 8910 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || || |||| | || | || ||||| || | ||||| ||||| Sbjct 8909 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 8850 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 8849 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 8812 >seq42 Length=38796 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| ||||||||||| ||| | || | |||| || |||||| || |||| Sbjct 21242 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 21301 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 || || || ||| | ||||| || || ||||| || || || || |||||||| ||| Sbjct 21302 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 21361 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || | ||||| | | | || ||||| || | || || ||||| Sbjct 21362 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 21421 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| |||||| ||||| | ||| | ||| ||||| Sbjct 21422 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 21459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818754845810