Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq97 122 7e-23
seq196 96.9 3e-15
seq12 84.2 2e-11
>seq97
Length=405077
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || |||| || || || |||| |||| ||||||||||||||||||||||||||||
Sbjct 387468 TTGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCC 387409
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| || ||| | |||| ||||| || || || ||| |||| | ||||| ||||||
Sbjct 387408 GACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGA 387349
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | ||| || || || ||||| || || | | ||| || || || |||
Sbjct 387348 GGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCG 387289
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||||||||| |||||||| || ||||| || || |||||
Sbjct 387288 ACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387239
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| || | |||| |||| ||||||||||||||| ||||| || || | |
Sbjct 387009 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGAC 386950
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| | |||| ||||||||||| || ||| |||| | ||||| || ||| ||
Sbjct 386949 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 386890
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | ||| || ||| | |||
Sbjct 386889 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 386830
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| || || | || ||||| || ||||||||
Sbjct 386829 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| || | |||| || | ||| ||||||||||| ||||||||||| | |
Sbjct 386781 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 386722
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | |||||||| || || || ||| |||| ||||| || ||||| ||
Sbjct 386721 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 386662
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | ||| || || || |||
Sbjct 386661 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 386602
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||||||||| || || || || ||||| || || |||||
Sbjct 386601 TCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386555
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| || | |||| || | ||| ||||||||||| ||||||||||| | |
Sbjct 387237 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 387178
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | |||||||| || || || ||| |||| ||||| || ||||| ||
Sbjct 387177 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 387118
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | ||| || ||| | |||
Sbjct 387117 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 387058
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| || || | || ||||| || ||||||||
Sbjct 387057 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 387011
>seq196
Length=158208
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || ||||||||||||||||| ||||| ||||| | |
Sbjct 147419 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 147478
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | |||| |||| || || || ||| | || | ||| || ||||| ||
Sbjct 147479 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 147538
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | | | ||| || | || |
Sbjct 147539 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 147598
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | |||||| ||||| |||||||| || ||||| || |||||||| |||
Sbjct 147599 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 147649
>seq12
Length=130387
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
||||||||||| || ||||||||||| ||||| | || |||| |||| |||| ||
Sbjct 12075 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGC 12016
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || ||| | || | ||| || ||||| || | ||||||||||| ||||||
Sbjct 12015 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 11956
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
|| || | | | | ||| ||| | || ||||| || |||||||| || ||
Sbjct 11955 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 11896
Query 21153 AACGTTTTGACAAA 21166
|| || ||||||||
Sbjct 11895 AAAGTCTTGACAAA 11882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422257208388092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |