Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq196 109 5e-19
seq97 98.7 8e-16
seq82 89.7 4e-13
seq30 87.8 1e-12
seq21 84.2 2e-11
seq12 84.2 2e-11
>seq196
Length=158208
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 147648 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 147589
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | | || ||||| || ||| || || |||||| | || ||
Sbjct 147588 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 147529
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || ||||||||||| || |||| || | || |||
Sbjct 147528 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 147469
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||| || ||| | ||| |||| || |||| |||| ||
Sbjct 147468 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 147419
>seq97
Length=405077
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || ||||| || || |||||||| || || || |
Sbjct 386555 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 386614
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| ||| | | | | ||||| || ||| || || |||||| | || ||| |||
Sbjct 386615 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 386674
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || ||||| || || ||| |||| ||| | |||| || | || || ||
Sbjct 386675 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 386734
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| |||||||| |||||||||||| |||| ||
Sbjct 386735 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTT 386766
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| ||| |||| || || ||||| ||| || || | |
Sbjct 387011 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 387070
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| || || |||||| | || ||| |||
Sbjct 387071 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 387130
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || ||||| || || ||| |||| ||| | |||| || | || || ||
Sbjct 387131 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 387190
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| |||||||| |||||||||||| |||| ||
Sbjct 387191 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTT 387222
>seq82
Length=49194
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
||||||| ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 41305 TCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 41364
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 41365 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTAATCT 41424
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || |||||||| ||||||||||
Sbjct 41425 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAGGAAT 41484
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | || | || || |||| |||| ||
Sbjct 41485 CCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 41518
>seq30
Length=183202
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 25044 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 25103
||| | || || ||||| || |||||||| || ||| ||| | | || || |
Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252
Query 25104 GCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 25163
| | || |||| || ||| || ||||||||| | || || ||||||||| |
Sbjct 32253 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32312
Query 25164 ATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAG 25223
|||||||| || || ||||||||||| | ||| || |||| ||||| |||||||||
Sbjct 32313 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32372
Query 25224 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| ||| | || | || || |||| |||| ||
Sbjct 32373 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32410
>seq21
Length=122314
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || |||||| | || |||||||||||| | |||||||| || || |||||||||
Sbjct 94125 GACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 94066
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
|| | |||| | | || ||||| || ||||||||||| ||| | || |||| ||
Sbjct 94065 GACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTCTTG 94006
Query 25248 CGATTACGAGGAGG 25261
||||| |||| ||
Sbjct 94005 AGATTAAGAGGTGG 93992
>seq12
Length=130387
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
|||| || ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 11886 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 11945
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 11946 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 12005
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| |||||||| ||||
Sbjct 12006 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 12065
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | ||| | || || |||| |||| ||
Sbjct 12066 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410794862451218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |