Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq22 242 4e-59 seq97 89.7 5e-13 seq30 82.4 8e-11 >seq22 Length=276364 Score = 242 bits (268), Expect = 4e-59 Identities = 515/761 (68%), Gaps = 11/761 (1%) Strand=Plus/Plus Query 116615 TTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGG 116674 |||||||| || |||| || || |||| |||||| |||||||| || |||||| Sbjct 269099 TTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTCTTTCTGG 269158 Query 116675 ACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGAC 116731 || | |||||| | || |||||||||| | |||||| | | ||||||| Sbjct 269159 ACTGCCGAGGAAATCGATTTGTCCAAGGATATCCATGACTGGAACAACAGAATGAACGAA 269218 Query 116732 AACGAGCGCCATTTCATC--AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCG 116789 ||||| | |||||| ||| || || ||||| ||||||||| |||||| || | Sbjct 269219 AACGAAAGGTTCTTCATCTCAAGA--GTCCTTGCCTTCTTCGCCGCCTCCGACGGTATTG 269276 Query 116790 TCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCT 116849 ||||||| || |||||||| |||| | ||||| ||| | | || || | | | Sbjct 269277 TCAACGAAAACTTGGTCGAGAATTTCTCCACCGAGGTCCAGATCCCGGAAGCCAAGAGTT 269336 Query 116850 TCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCG 116909 ||||||| || || ||||| || || ||| | || || |||| || || | |||| Sbjct 269337 TCTACGGTTTCCAAATCGCTATCGAAAACATTCATTCCGAAACCTACTCCTTGTTGATCG 269396 Query 116910 ACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT-TTGTTGAACGCCATCGAGACGATG 116968 | || ||| | | | |||| ||| | ||||| ||||||||||| || || Sbjct 269397 ATACCTACATCAAGGATCCAAAGGA-AAGTGAATTCTTGTTCAACGCCATCGACACCATC 269455 Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || | ||||||||||| ||||| || | |||||| | | ||| || Sbjct 269456 CCAGAAATTTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAAGACGCAGACGCGCTG 269515 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||||| || | || || ||||||||| || |||| || || ||||| || || ||| Sbjct 269516 TTCGGTGAAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTC 269575 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 ||| |||| || ||| | ||||| | || | |||||||| |||| ||| ||||||| Sbjct 269576 GCCTCCATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAG 269635 Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208 | |||| ||| ||||| ||| |||| |||||||||||||||| ||||| |||||| Sbjct 269636 TTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCATTTG 269695 Query 117209 GTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAG 117268 | | ||| | | || |||| | | ||||||||||| || |||| ||||| Sbjct 269696 AAGAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAA 269755 Query 117269 CAGCGCTTCCTCACCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAACGAT 117327 || | | | || || || |||| || || | |||| || | ||| ||| ||| Sbjct 269756 CAAAGATACTTCCTAGACGCCTTGCCAGTCGCCT-TGCTAGGTATGAATGCCGACTTGAT 269814 Query 117328 GTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCG 117368 | || ||| ||||||||||||| ||||| ||| || ||| Sbjct 269815 GAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCG 269855 >seq97 Length=405077 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || ||||| ||| | || ||||| | | Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| || || || || |||| || Sbjct 386843 GACACCATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCA 386901 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | || | || || ||||||||||| |||| | || || || ||||| Sbjct 386902 ACAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAA 386961 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| ||||| | || ||| | |||| || || Sbjct 386962 CATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009 >seq30 Length=183202 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | || || ||||||||||| | || || ||| | | |||| | | Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||| || |||| |||||||| || ||||| | ||||| ||| || | Sbjct 32253 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32312 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || || |||| |||| | ||| | |||||||||||| || ||| Sbjct 32313 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32372 Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||| | ||| |||| ||| | ||||| || || Sbjct 32373 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216707627120