Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq206 123 2e-23 >seq206 Length=407341 Score = 123 bits (136), Expect = 2e-23 Identities = 412/640 (64%), Gaps = 41/640 (6%) Strand=Plus/Minus Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCT---TTAAA 96968 ||||| || || |||| ||| || |||| ||| ||| | || | || ||||| Sbjct 197178 CATTTGGATTCTTGGGTGAGGATTGTAGTCTTC---AATTTCGAAATCTTCTAACTTAAA 197122 Query 96969 ATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG 97028 |||||||| || ||| | || || ||||| | | ||||| || || ||| || Sbjct 197121 GTCATCAATTTCTGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCTTGGATCTCT 197062 Query 97029 CGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGT 97088 | || || || | | |||||||| |||| | ||| | || ||||| || ||||| Sbjct 197061 TGAAATTTGTTCATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGT 197002 Query 97089 GTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGA 97148 ||||| || || || || | | |||| ||| | || ||||| | ||| | ||| | Sbjct 197001 ATGAATGAACTCACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGC 196942 Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208 ||| || || ||||| ||||| || || ||||||||| || | ||| || | | Sbjct 196941 ATATGAGGCGATATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAA 196882 Query 97209 ACAGGAAAG-------------CTT-----TCCATC---------ACACACATAAAACTG 97241 || ||||| ||| ||| || || |||||||| || Sbjct 196881 GCACGAAAGGCGAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTG 196822 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301 || | || || || || || ||||| || || |||| |||||||| | Sbjct 196821 TGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCT 196762 Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361 ||| | ||||||||||| |||||||| | || | | || | |||||| | || Sbjct 196761 CATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTG 196702 Query 97362 ATCAACGCCTTCTCCACCATA---ATTGT-GCTTAAGACCTTGATATTCTGCTCCAAAAT 97417 ||| | |||| ||| ||| || || || || |||| |||| || ||||||| Sbjct 196701 ATCGATACCTTGTCCGGTATAGTCATCGTCGC---AGGTCTTG-TATTTGGCACCAAAAT 196646 Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477 | ||||||||||| ||||||||||| || || || ||| ||| ||||| || || | Sbjct 196645 GTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCATGAGTCCCA 196586 Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 ||| || ||||| | ||||||||| | |||||||| Sbjct 196585 TCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAAT 196546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782364371590