Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq97 102 7e-17 seq22 82.4 7e-11 >seq97 Length=405077 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | | |||||| |||||||| | |||||||| ||||| ||||| || || Sbjct 386783 TACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTG 386724 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | |||||| || || || ||||| | || || | || || || |||| Sbjct 386723 ACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAG 386664 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| ||| || || || | |||| ||||| | | ||||| Sbjct 386663 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGA 386604 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || |||| ||| || || ||||||||||| Sbjct 386603 CCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386555 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | | |||||| |||||||| | || ||||| ||||| ||||||||||| Sbjct 387011 TACCACCTCTCAGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAG 386952 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | || || |||||||| ||||| | || | | ||| ||||| |||| Sbjct 386951 ACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAG 386892 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| ||| || || || | |||| |||||| | ||||| Sbjct 386891 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGA 386832 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || ||||| || || || || || ||||| Sbjct 386831 CCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783 >seq22 Length=276364 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || | ||||| ||||| ||||||| || ||||| || ||| || || | Sbjct 269522 GAAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCC 269581 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || |||||| ||||| Sbjct 269582 ATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATC 269641 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTG 45009 | |||||||||||| |||||||| |||||||||| Sbjct 269642 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTG 269676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828353811804