Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq97 102 8e-17 >seq97 Length=405077 Score = 102 bits (112), Expect = 8e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||| || ||||| | || ||||| ||||| ||||| ||||| || || || ||| Sbjct 386995 CAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTC 386936 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||| ||||||||||||||| | |||| | || ||||| ||||| || ||||| ||||| Sbjct 386935 TTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC 386876 Query 139672 GGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| | || | || | | || | ||||| | | ||| ||||| | ||| | | Sbjct 386875 -TTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGG 386817 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || |||| || || ||||| ||||||||| Sbjct 386816 TCTTACCAGTCAGTGTCTTGACGAAGATTTGCATA 386782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| |||||||||||||| || || || || |||||| Sbjct 387447 ACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCTTCC 387388 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 || || ||||| ||| | |||| | || || || ||||| ||||| ||||| || Sbjct 387387 AGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGT 387328 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || |||| | || | ||||||| || ||| ||||| | || | ||||| Sbjct 387327 ATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTA 387268 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || || ||||| || |||||| Sbjct 387267 CCGGTTAAAGTCTTGACGAAAATCTGCATA 387238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061600290400