Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq97 102 8e-17
>seq97
Length=405077
Score = 102 bits (112), Expect = 8e-17
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
||| || ||||| | || ||||| ||||| ||||| ||||| || || || |||
Sbjct 386995 CAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTC 386936
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| ||||||||||||||| | |||| | || ||||| ||||| || ||||| |||||
Sbjct 386935 TTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC 386876
Query 139672 GGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| | || | || | | || | ||||| | | ||| ||||| | ||| | |
Sbjct 386875 -TTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGG 386817
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || |||| || || ||||| |||||||||
Sbjct 386816 TCTTACCAGTCAGTGTCTTGACGAAGATTTGCATA 386782
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | || ||||| |||||||||||||| || || || || ||||||
Sbjct 387447 ACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCTTCC 387388
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|| || ||||| ||| | |||| | || || || ||||| ||||| ||||| ||
Sbjct 387387 AGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGT 387328
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || |||| | || | ||||||| || ||| ||||| | || | |||||
Sbjct 387327 ATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTA 387268
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| || || || ||||| || ||||||
Sbjct 387267 CCGGTTAAAGTCTTGACGAAAATCTGCATA 387238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496061600290400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |