Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 4e-27
>seq4
Length=240824
Score = 136 bits (150), Expect = 4e-27
Identities = 340/509 (67%), Gaps = 13/509 (3%)
Strand=Plus/Plus
Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952
|| || ||||||| || | |||||| ||||| ||||| || ||||||| |||| |||
Sbjct 6964 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 7023
Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012
|| ||||| || || | ||||| || ||||| || || | || |||| | |||||
Sbjct 7024 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 7083
Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTC 14071
|| | || || ||| |||||| | || | || | || |||||| || |||||||||
Sbjct 7084 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTC 7142
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131
| || | || || || | ||| ||||| || || |||| | |||||
Sbjct 7143 GGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTT 7202
Query 14132 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189
|| | ||||| |||| ||||| || | ||| || |||||||||| || |||||
Sbjct 7203 AGGGTCCTTGA--TGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCA 7260
Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249
|| || || ||||| || || | | || || | ||| ||||| | | | ||
Sbjct 7261 ATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAG 7320
Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14309
|||| |||| ||||||||||| ||||| ||| ||| || ||||| || | | |
Sbjct 7321 TTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG 7380
Query 14310 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATC--GGATAAATCCTTAG 14364
||| || || ||| | | ||| | | || ||||| || |||| ||||||||
Sbjct 7381 GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAT--ATCCTTAG 7438
Query 14365 AAAGATCTACTTCATCAACTGTCCAAAAA 14393
| | ||| | ||| ||| | ||||| |||
Sbjct 7439 ACAAATCAATTTCTTCAGCGGTCCAGAAA 7467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479725679315800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |