Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq97 107 1e-18
seq196 104 2e-17
>seq97
Length=405077
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | |||||| || ||||| || | |||| ||||||||| | |||||||| |||
Sbjct 387009 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGAC 386950
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| |||| ||||| || ||||||||||| | ||||||||| | ||
Sbjct 386949 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 386890
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| ||||| || | | ||||| || ||||||
Sbjct 386889 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 386830
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| ||||| || || || || || || || || || ||||||||
Sbjct 386829 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
Score = 107 bits (118), Expect = 1e-18
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||| ||||| || | |||| ||||||||| | || || || ||||| || |
Sbjct 387456 AGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTG 387397
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
|||| |||| ||| || |||||||||||||| | |||||| || | || | || |||
Sbjct 387396 CCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCT 387337
Query 43012 TTTTCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCG 43069
|| || ||| ||| ||||||| || || | | |||||| | |||||| || | |
Sbjct 387336 TTATC-CTGTATCTTACTCTTT-ACATTGTCGATCGTGTCGGAGGACTCGACCTCCAAAG 387279
Query 43070 TTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || || || ||||||| ||| || || ||||| |||||
Sbjct 387278 TAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387239
>seq196
Length=158208
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | |||| ||||||||| | ||||| || |||
Sbjct 147419 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 147478
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | |||| |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 147479 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 147538
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| ||||| || ||| ||||| || || ||
Sbjct 147539 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 147598
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 147599 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 147648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381367801246446
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |