Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq206 98.7 1e-15
seq176 87.8 2e-12
>seq206
Length=407341
Score = 98.7 bits (108), Expect = 1e-15
Identities = 363/567 (64%), Gaps = 35/567 (6%)
Strand=Plus/Minus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATC 6758
||| |||||||| || ||| | ||| |||||||| || ||||| ||| | |||| ||
Sbjct 197166 TGGGTGAGGATTGTAGTCTTCAATTTCGAAATCTTCTAACTTAAAGTCA--TCAATT-TC 197110
Query 6759 AGACttttt--ttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTTAA--TTGTT 6814
| | | ||||||| || | || ||| | | | | |||| | || |||||
Sbjct 197109 TGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCT-TGGATCTCTTGAAATTTGTT 197051
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
| || | || | |||||||| ||| | ||| ||||| || | |||||||| || |
Sbjct 197050 CATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGTATGAATGAACT 196991
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
|||| |||| ||||||||| ||| ||| || | || | || ||||| || || |
Sbjct 196990 CACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGCATATGAGGCGA 196931
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAA------CA-------- 6980
|||||| || ||||| | |||||||| || | ||| || ||
Sbjct 196930 TATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAAGCACGAAAGGC 196871
Query 6981 ----TTGACAAGATAAAATATTGTCTATAG---------CATAAAATTGACACAATACAT 7027
|| || | | | | ||| | | |||||||||| | || | |
Sbjct 196870 GAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTGTGAAAAAATGT 196811
Query 7028 GACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATAC 7087
| ||||| ||||| | || || | ||| | || |||||||| |||| | || |
Sbjct 196810 GGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCTCATGATGATTC 196751
Query 7088 GTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCT 7147
|||||||| || ||||| |||||||| ||||| | | ||||| ||||| |
Sbjct 196750 TTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATACCTT 196691
Query 7148 GACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACC 7207
| || ||| | | | || | | || || || ||||||||||||||||| ||||
Sbjct 196690 GTCCGGTATAGTCATCGTCGCAGGTCTTGTATTTGGCACCAAAATGTCTCCATTGGAACC 196631
Query 7208 CATAAATAGGACCTAAATCACCTTCTT 7234
|||||| |||||| | ||| ||| |||
Sbjct 196630 CATAAACAGGACCCAGATCCCCTACTT 196604
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 56416 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 56475
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 56476 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTTCCAGATTTAATTATCAAT 56535
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 56536 CCTCATGCTATTCCATCTCGTATGAC 56561
>seq176
Length=107501
Score = 87.8 bits (96), Expect = 2e-12
Identities = 252/385 (65%), Gaps = 16/385 (4%)
Strand=Plus/Plus
Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664
|| |||||||| ||||||||| | || | || ||||| ||| ||||||| || |
Sbjct 57768 AAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTCAGAAGAAAACATC 57827
Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGA--AAGCAGGTTTAGCTAGTAAAT 164722
| || || || | || || |||| |||| | ||| ||| || | | | |
Sbjct 57828 CGTAATTTATTCAAAGACGCAGAAGCAGAATACAAGGCCAAGGGGGATGAATC--TTCCT 57885
Query 164723 TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAA---------ACGTGGTG 164773
||||| | || |||||||||| | ||| || ||| ||| | | | ||||
Sbjct 57886 TACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTG 57945
Query 164774 ATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAG 164830
|| || | | | || || || |||||||| ||||| ||||||| || ||||| |
Sbjct 57946 ATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAATGGACGGTGTTG 58005
Query 164831 AATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATG 164890
| | |||||||| || | | |||||||||||||| ||||| || ||| ||
Sbjct 58006 ATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATTTGATCGATATTG 58065
Query 164891 CTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAG 164950
|| | ||||| || ||| |||| ||| | | | ||||| ||||| ||| || |||
Sbjct 58066 CTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAG 58125
Query 164951 GACGCCTTCAAATTTTAAAAGTTCA 164975
| | || || ||||| || ||||
Sbjct 58126 GTAGACTGCAGATTTTTGAAATTCA 58150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595869117469200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |