Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq185 122 1e-23
seq218 107 3e-19
seq42 95.1 2e-15
>seq185
Length=113775
Score = 122 bits (134), Expect = 1e-23
Identities = 191/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 34595 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 34653
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 34654 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 34713
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | |||| ||| || || | || || ||
Sbjct 34714 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 34773
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || | ||| | || ||||| ||||| | |||||
Sbjct 34774 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 34833
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | |||||||| || ||||||||
Sbjct 34834 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 34864
>seq218
Length=24388
Score = 107 bits (118), Expect = 3e-19
Identities = 186/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 21333 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 21275
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 21274 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 21215
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 21214 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 21155
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 21154 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTGTATGCTTTGAAGAGACAAGG 21095
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 21094 TAGAACCTTATATGGTTTCGGTGGTTAA 21067
>seq42
Length=38796
Score = 95.1 bits (104), Expect = 2e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| |
Sbjct 33942 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 34001
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
|||||||| |||| || || |||| ||||| | | | ||| |||||| ||| |
Sbjct 34002 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 34061
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| |||| ||| || || | || || || ||||| || | |||||||| || |
Sbjct 34062 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 34121
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| | ||| | || || || ||||| | ||||| | | | || ||||| || |||
Sbjct 34122 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 34181
Query 16698 AA 16699
||
Sbjct 34182 AA 34183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074846163191
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |