Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq97 123 2e-23
seq30 118 1e-21
seq12 105 6e-18
seq21 96.9 3e-15
>seq97
Length=405077
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || ||| | || | || ||
Sbjct 387011 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 387070
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||| ||||| || ||||| || |||
Sbjct 387071 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 387130
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946
|||||||| |||| | || || ||||| || |||| ||||| |||| |||||||
Sbjct 387131 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCA--GACTATA 387188
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||| ||||| || |||||| | || ||||| ||||||| ||||| ||
Sbjct 387189 ACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 387237
Score = 116 bits (128), Expect = 4e-21
Identities = 174/245 (71%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812
|||| | | | ||| ||||| | || || || || || ||||| || | || || |
Sbjct 386539 TTTTAAATAAGACACTATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTT 386598
Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872
|| | || || |||||| ||||| | ||||| |||||| ||||| |||||
Sbjct 386599 GGAGGTCGAGTCCTCCGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGG 386658
Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA- 26931
|| ||||| || ||||||||||| |||| | || || ||||| || |||| |||||
Sbjct 386659 TATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAAC 386718
Query 26932 -ACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990
|||| ||||||||||| ||||| || |||||| | || ||||| ||||||| |||
Sbjct 386719 TTTGTCA--GACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGA 386776
Query 26991 GGAGG 26995
|| ||
Sbjct 386777 GGTGG 386781
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || ||| | || | || ||
Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||| ||||| || ||||| ||||||
Sbjct 386843 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 386902
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| | || ||||| || ||||| | |||| | || || |||
Sbjct 386903 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 386962
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| || || ||| | || ||||| ||||||| ||||| ||
Sbjct 386963 ATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || ||||| || || | || || | || | || || |
Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | || || ||||| || ||||| || || ||||| || |||
Sbjct 387299 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387358
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| | ||| || ||||| ||||| | |||| | |||||||||
Sbjct 387359 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387418
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|||||||| || || ||| | || ||||||| ||||| ||||| || ||
Sbjct 387419 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAA 387468
>seq30
Length=183202
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| ||| | ||||| | ||| | ||||| ||||||||
Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| |||||| ||||||||||| || || || || ||||||||| |
Sbjct 32253 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32312
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | |||||| |||||||||||
Sbjct 32313 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32372
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| | ||| ||||| | ||||| ||
Sbjct 32373 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32410
>seq12
Length=130387
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || || ||||| || | ||||| | ||| | ||||| ||||| ||
Sbjct 11882 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11941
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||||| ||||| ||||| || || || || ||||||||| |
Sbjct 11942 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 12001
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | ||||| ||||||||||||
Sbjct 12002 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 12061
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | || | ||| ||||| | ||||| ||
Sbjct 12062 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12099
>seq21
Length=122314
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| || | ||||| | ||| | ||||| ||||||||
Sbjct 94209 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 94150
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||| ||||| ||||| || || || |||||||||||| |
Sbjct 94149 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTG 94090
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | ||||| ||||| |||||
Sbjct 94089 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 94030
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| ||||| ||||| | ||||| ||
Sbjct 94029 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 93992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660084470640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |