Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq196 104 2e-17
seq30 95.1 1e-14
seq12 93.3 4e-14
seq97 86.0 5e-12
seq82 84.2 2e-11
>seq196
Length=158208
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| ||||| || | || || || || |||||| | ||| || ||
Sbjct 147648 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 147589
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| || ||||| || || || ||| || || ||||| | || |||
Sbjct 147588 TCAGACACTATT-GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGA 147530
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || || ||||| ||||| | || ||| || | || ||
Sbjct 147529 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTA 147470
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| ||||| ||| |||| |||| ||||||||| |||| ||
Sbjct 147469 CAACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 147419
>seq30
Length=183202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 115310 ACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACA 115368
|| || |||||||| || | ||| || || ||||| ||| |||| || |||
Sbjct 32208 ACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTG-ACAATGTCAAATC 32266
Query 115369 AAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAA 115428
|| ||| || |||||||| |||| ||| || |||||| | || | ||| || ||
Sbjct 32267 CAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAA 32326
Query 115429 ACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACA 115488
||||| ||||| | | |||| || |||| || ||||||||||| || || ||| ||||
Sbjct 32327 GCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACA 32386
Query 115489 TATGGTGTTGAGATTGCGAGGAGG 115512
| | || ||||||||| |||| ||
Sbjct 32387 TTTAGTCTTGAGATTGAGAGGTGG 32410
>seq12
Length=130387
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
||||||||| || | || || || ||||| || | ||| || || |||||| |
Sbjct 11881 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 11940
Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412
|| |||| || || ||| ||| || || ||||| |||| ||| || ||||||
Sbjct 11941 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 11999
Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472
| || | ||| || || ||||| ||||| | | |||| || | || || ||||||||||
Sbjct 12000 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 12059
Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||| || ||| | || | || ||||||||| |||| ||
Sbjct 12060 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12099
>seq97
Length=405077
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| ||||| || | || || || |||||||| | || |||||| |
Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| ||||| || || |||||||| ||| | || || ||
Sbjct 387299 GACAC-GATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCA 387357
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| || | |||| ||| || || ||| | ||||| | || ||| || | || |||||
Sbjct 387358 ACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAA 387417
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
||||||||| ||||| ||| | || |||| | ||| | |||| || ||
Sbjct 387418 CATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAA 387468
>seq82
Length=49194
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
|||||||||||| | || || || ||||| || | ||| || || ||||| |
Sbjct 41300 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41359
Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412
| ||||| || || ||| ||| || || ||||| | || ||| || ||||||
Sbjct 41360 T-GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 41418
Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472
| || | ||| || || ||||| ||||| | | |||| || | || || || || ||||
Sbjct 41419 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 41478
Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| || || ||| ||||| | || ||||||||| |||| ||
Sbjct 41479 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 41518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425341993838440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |