Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq97 98.7 9e-16 seq196 86.0 6e-12 seq30 84.2 2e-11 >seq97 Length=405077 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||||||||| || || || || | ||| || || ||||| || Sbjct 387435 GTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCG 387376 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || || | ||| ||||||||||| || || ||||| || || || ||| Sbjct 387375 GCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTT 387316 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| |||||||| || | |||| ||| |||||||||| ||| Sbjct 387315 ACATTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCGGTTAAAGTC 387256 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 387255 TTGACGAAAATCTGCAT 387239 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||| ||||| || || || || | ||||| || ||||| || Sbjct 386751 GTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCA 386692 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || | | || ||||| ||||| || ||||| ||||| || || |||| Sbjct 386691 GCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 386632 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| |||||||| || | |||| ||| ||||| || | ||| Sbjct 386631 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCAGTCAAAGTC 386572 Query 131218 TTTACGAAAATCTGCA---TGACTTATTT 131243 || ||||||||||||| || ||||||| Sbjct 386571 TTGACGAAAATCTGCATAGTGTCTTATTT 386543 >seq196 Length=158208 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || |||| || ||||||||||| |||||||| || | Sbjct 147419 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 147478 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || | ||||| || || |||| || | || ||||| || || Sbjct 147479 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 147538 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||| || | || || | Sbjct 147539 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 147598 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || |||||||||| ||| || |||||||| ||||| Sbjct 147599 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 147645 >seq30 Length=183202 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || |||||||||| || || ||||||||||||||||| ||| | Sbjct 32410 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 32351 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||| || | ||||| || || |||| || | || ||||| || ||| Sbjct 32350 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 32291 Query 131128 ATTCCTTCTTTGTC 131141 || ||||||||||| Sbjct 32290 ATACCTTCTTTGTC 32277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010516638080