Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq97 187 5e-42
seq196 178 2e-39
seq21 161 2e-34
seq12 161 2e-34
seq82 156 8e-33
seq30 147 4e-30
seq22 111 3e-19
>seq97
Length=405077
Score = 187 bits (206), Expect = 5e-42
Identities = 169/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || ||||| |||||||||||||| || || | || || |||||
Sbjct 387223 CAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATC 387164
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|| | ||||| || || || || |||||||||||||| || ||||| |||||||||||
Sbjct 387163 CTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 387104
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||||| ||||||||||| | || || || || ||||| |||||
Sbjct 387103 TTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGT 387044
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| || |||||
Sbjct 387043 CTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 387011
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || ||||| |||||||||||||| || || | || || |||||
Sbjct 386767 CAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATC 386708
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|| | ||||| || || || || |||||||||||||| || ||||| |||||||||||
Sbjct 386707 CTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 386648
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||||| ||||| ||||| | || || || ||||| || |||||
Sbjct 386647 TTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGT 386588
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| ||||||||
Sbjct 386587 CTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386555
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || |||||||| ||||||||||| ||||| || || || || || ||
Sbjct 386995 CAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTC 386936
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | ||| || || || || || | || ||||| || || ||||| |||||||||||
Sbjct 386935 TTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC 386876
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||||| ||||||||||| | || || || || ||||| |||||
Sbjct 386875 TTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGT 386816
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| || |||||
Sbjct 386815 CTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
Score = 140 bits (154), Expect = 6e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||||| || || | || | | |||||||| || |||||||| ||||| |||||||
Sbjct 387473 TTTAATTGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTAT 387414
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || | || || || ||||| | ||||| ||||| || || | || |||||||
Sbjct 387413 AGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGT 387354
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || |||||||| || || || || ||||| ||| || ||||| ||||| | |
Sbjct 387353 CCGGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGG 387294
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || ||||| || ||||| || || || | ||||||||||| ||||||||
Sbjct 387293 ACTCGACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387239
>seq196
Length=158208
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| |||||||| ||||||||||| || || || | || || || ||
Sbjct 147433 CAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTC 147492
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 147493 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 147552
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || || ||||||| ||||| ||||| | ||| || ||
Sbjct 147553 TTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGT 147612
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 147613 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 147645
>seq21
Length=122314
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| |||| ||||| || ||||||||||| || || || || || || || ||
Sbjct 94006 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 94065
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | ||||||||| || ||||| || |||||||||||
Sbjct 94066 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTC 94125
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 94126 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 94185
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 94186 CTTACCAGTCAAAGTCTTAACGAA 94209
>seq12
Length=130387
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| | ||||| |||||||| ||||| || || || | || || || ||
Sbjct 12085 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 12026
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 12025 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 11966
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 11965 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 11906
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | |||||||| ||
Sbjct 11905 CTTACCAGTCAAAGTCTTGACAAA 11882
>seq82
Length=49194
Score = 156 bits (172), Expect = 8e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || |||||||| || || || || | || || || ||
Sbjct 41504 CAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCGTC 41445
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || ||||| |||||||||||
Sbjct 41444 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTC 41385
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 41384 TTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 41325
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || ||||| ||
Sbjct 41324 CTTACCAGTCAAAGTTTTGACAAA 41301
>seq30
Length=183202
Score = 147 bits (162), Expect = 4e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || ||||| ||||| || ||||| | || || || ||
Sbjct 32396 CAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 32337
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || ||||| |||||
Sbjct 32336 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 32277
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||| || |||||||| | ||||| ||||| | ||||||||
Sbjct 32276 TTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGT 32217
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
||| || || | ||||| |||||
Sbjct 32216 TTTACCAGTCAAAGTCTTAACGAA 32193
>seq22
Length=276364
Score = 111 bits (122), Expect = 3e-19
Identities = 300/456 (66%), Gaps = 6/456 (1%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||| ||||| || || || | ||||||||||||| ||| || |
Sbjct 269980 CATGACACCGGCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 269921
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
| ||||||| |||||||| || |||||||| ||| | | | ||| || |||
Sbjct 269920 CAAGGAAATGTTTTCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACC 269861
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| || || | | ||| || |||||||||| ||||||| |||||| ||| | ||
Sbjct 269860 GAAGGCGACCAACAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATT 269801
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT-CCTT--TTCGTTGGCGAC 10171
||| || | || | | || | |||||| | ||||| ||| |||| | ||||
Sbjct 269800 CATACCTAGCAAGGCGACTGGCAAGGCGTC---TAGGAAGTATCTTTGTTCGATCTCGAC 269744
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || |||||| ||| || | | | || | ||||||||| | | | |
Sbjct 269743 GGCCTCGGTGACGATTTTCTCGACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAA 269684
Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291
|| | |||| | ||| | || ||||| | || ||| ||||||||||| ||
Sbjct 269683 CAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAA 269624
Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351
|| |||||||| | || | || || |||||| |||| | ||| ||||||||
Sbjct 269623 GGTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGA 269564
Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAG 10387
||| | || ||| || | | || | ||||||| ||
Sbjct 269563 GAAGAAAACACCTTCGATGGACGCGAAGGCGACTAG 269528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921617941651640
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