Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq22 223 7e-53 >seq22 Length=276364 Score = 223 bits (246), Expect = 7e-53 Identities = 584/874 (67%), Gaps = 28/874 (3%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCAT-GTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 ||| || |||| || |||||| | || ||||||| || || ||| |||||| || Sbjct 269105 ATCCAGTACCACGAGATCTGG-CAATCGTACAAGCGTGCCGAGGCCTCTTTCTGGACTGC 269163 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGA 42400 |||||| || || || ||||||| | | |||| | | || || ||||| Sbjct 269164 CGAGGAAATCGATTTGTCCAAGGATATCCATGACTGGAACAACAGAATGAACGAAAACGA 269223 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 || ||| ||| || || | || ||||||||||||||||| ||||| || ||||| || Sbjct 269224 AAGGTTCTTCATCTCAAGAGTCCTTGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGA 269283 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 ||| ||| | | ||| | ||||| ||| | || || | |||||||| Sbjct 269284 AAACTTGGTCGAGAATTTCTCCACCGAGGTCCAGATCCCGGAAGCCAAGAGTTTCTACGG 269343 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 ||||| || || || || ||| | || || || ||| || || || | || || Sbjct 269344 TTTCCAAATCGCTATCGAAAACATTCATTCCGAAACCTACTCCTTGTTGATCGATACCTA 269403 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| |||||| || || | ||||||| ||||| || || || || || Sbjct 269404 CATCAAGGATCCAAAGGAAAGTGAATTCTTGTTCAACGCCATCGACACCATCCCAGAAAT 269463 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCG 42699 ||||||| || ||||| || | |||||| | || | | ||||| |||||| | Sbjct 269464 TTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCA-AGACGCAGACGCGCTGTTCGGTG 269522 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 | || || || ||||| | || |||| || | |||||||| || |||||||||||| Sbjct 269523 AAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCA 269582 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||| | ||| ||| |||| | ||||||||| | |||||||| ||||| | ||| Sbjct 269583 TCTTCTGGTTGAAGAAGAGAGGTAT-GATGCCCGGGTTGACCTTCTCCAACGAGTTGATC 269641 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 |||| ||||| || |||| | ||||||||||| | ||||| | ||| | | | Sbjct 269642 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGC---CCATTTGAAG 269698 Query 42879 CACAAGCCCTCGAAGGAGC--GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA-- 42934 ||||||| || ||| ||| | ||| |||| |||||||| |||||||| Sbjct 269699 AACAAGCC--GGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAAC 269756 Query 42935 GAAG-GAGTTCCTCACGCAGTCGC--TGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| | ||||| || ||| |||| || || || | || ||||| |||| | Sbjct 269757 AAAGATACTTCCT-----AGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGCCGACTT 269811 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG 43051 ||| | ||||| || ||| |||||| ||| || || | | ||| || Sbjct 269812 GATGAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCGCCTTCGGTAACAAGAA 269871 Query 43052 CCTCTACAA-CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 |||||| || | ||||||||| || ||||| ||||| || |||| || |||| Sbjct 269872 GTACTACAAGGTCGAC-AACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGA 269930 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||| ||||| ||| | ||| |||||||||| Sbjct 269931 CCAACTTCTTCGAAAAGAGAGTCTCCGACTACCA 269964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334631759120