Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq196 96.9 8e-15 seq97 84.2 5e-11 >seq196 Length=158208 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || | |||||||| ||||| || || || ||| Sbjct 147455 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 147514 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | ||| || ||||| || || || || || | || || || Sbjct 147515 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 147574 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||||| ||||| || || || ||||| ||||| | |||||||||| Sbjct 147575 TCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 147634 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 147635 AAAATTTGCAT 147645 >seq97 Length=405077 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || | || | ||| || ||||| || |||||||| | Sbjct 387465 CCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGAC 387406 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | |||||||| | ||| || || || || |||| | |||||| || Sbjct 387405 AAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 387346 Query 288367 ATTCCTTCTTTATCCTGGATTTT-CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || ||||||||||| || || | |||| || || || || | ||| || || || Sbjct 387345 ATGCCCTCTTTATCCTGTATCTTACTCTTT-ACATTGTCGATCGTGTCGGAGGACTCGAC 387287 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| ||||| | |||||||||||| |||||||| Sbjct 387286 CTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648550757386