Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq97 113 5e-20 seq82 100 3e-16 seq12 95.1 1e-14 seq30 93.3 4e-14 seq214 87.8 2e-12 >seq97 Length=405077 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||||||||| || || | | || | ||||||| || ||||| ||| Sbjct 387435 GTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCG 387376 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || ||| ||||| |||||||| || ||||| || ||||| || |||| Sbjct 387375 GCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTT 387316 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || || || || | ||| | |||||| ||||| ||||| Sbjct 387315 ACATTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCGGTTAAAGTC 387256 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 387255 TTGACGAAAATCTGCAT 387239 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| | | || | ||||||| ||||| || || Sbjct 386979 GTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCA 386920 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || ||| || || |||||||| ||||| || ||||| || || ||| Sbjct 386919 GCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 386860 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | || || |||| |||| |||||| || |||| || Sbjct 386859 ACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTC 386800 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 386799 TTGACGAAGATTTGCAT 386783 >seq82 Length=49194 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| ||| | || ||||| ||||| || ||||| || | Sbjct 41519 ACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGA 41460 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| ||||| Sbjct 41459 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGG 41400 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 41399 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 41340 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || ||||||||||| || ||| Sbjct 41339 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 41300 >seq12 Length=130387 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || |||||||||||||||||||| || | Sbjct 12100 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 12041 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 12040 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 11981 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 11980 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 11921 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 11920 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 11881 >seq30 Length=183202 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| ||| | || ||||| |||||||||||||| || | Sbjct 32411 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 32352 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 32351 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 32292 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || || ||| || | || ||| | || || Sbjct 32291 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 32232 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 ||||| ||| | ||| || || |||||||| || ||||| Sbjct 32231 TTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32193 >seq214 Length=210230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 208/305 (68%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 155182 CCAA-ACCTCC-GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCC 155239 |||| |||||| || || |||||| || ||||| ||| |||||| ||||| || || Sbjct 7790 CCAATACCTCCAGCAGT-TTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACC 7848 Query 155240 TTTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAATTGAGGTTGAGGGC 155298 || ||| || || |||| | |||| |||||||| || || | |||||| | || Sbjct 7849 TTCAATGGAATCATCCTTCATTG-CAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAG 7907 Query 155299 AGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAAC-ATTTTGTTGGCGGTTAAGTTG 155357 || || ||||| || ||| || || ||||| ||||| | | ||||||| Sbjct 7908 TACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACA-TTAAGTTA 7966 Query 155358 TAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGC 155417 || ||||| | ||||| ||||||| |||||| ||||| | || || | ||| | Sbjct 7967 TAGGTTTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATT 8026 Query 155418 ATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTACCCATTTTCCAAA 155477 | ||| || || || ||||| | |||||||| | | |||||| | ||||||| Sbjct 8027 AAGTGCTGTGGACGTTCAGCAACTTGACCGTTGATTCTCAATAAGTAAGAACGTTCCAAA 8086 Query 155478 GTTTT 155482 ||||| Sbjct 8087 GTTTT 8091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642382968280