Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq82 116 3e-21
seq30 114 1e-20
seq97 111 1e-19
seq196 105 6e-18
seq6 82.4 7e-11
>seq82
Length=49194
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||||||||| || || | |||| ||
Sbjct 41506 CTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCG 41447
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| ||||| || ||||| ||||| ||
Sbjct 41446 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 41387
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 41386 TCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 41327
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| ||||||
Sbjct 41326 GTCTTACCAGTCAAAGTTTTGACAAAA 41300
>seq30
Length=183202
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||| || || || ||| | |||| ||
Sbjct 32398 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 32339
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 32338 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 32279
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||| ||||| || ||||| ||||| |
Sbjct 32278 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 32219
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
||||| || || | ||| || || ||
Sbjct 32218 GTTTTACCAGTCAAAGTCTTAACGAA 32193
>seq97
Length=405077
Score = 111 bits (122), Expect = 1e-19
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTT 45180
|| ||||| || | || || || || ||||||||||| ||||| | ||||| |||
Sbjct 386772 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGT--CTGACAAAGTTC 386715
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
|| ||| |||| ||| || || || | |||| || ||| ||||| || ||||| ||||
Sbjct 386714 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 386655
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || |||||||| || |||| || | || | |||||||| |||||||| || | |
Sbjct 386654 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAA 386596
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||| || || || || | ||| || || ||||| |||||
Sbjct 386595 GTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386555
Score = 107 bits (118), Expect = 2e-18
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACG--GTTT 45180
|| ||||| || | || || || || ||||||||||| ||||| || |||| |||
Sbjct 387228 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC--TGACAAAGTTC 387171
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
|| ||| |||| ||| || || || | |||| || ||| ||||| || ||||| ||||
Sbjct 387170 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 387111
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || |||||||| || |||| || | || | |||||| ||||||||||| || |
Sbjct 387110 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 387052
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | || || || || || || || || || ||||||||
Sbjct 387051 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 387011
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | ||||| || || ||||||||||| || ||||| | ||| |
Sbjct 387000 AGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTG 386941
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| |||| ||||| || || | ||||| | || || ||||| ||||| |||||
Sbjct 386940 CCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCC 386881
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| |||||||| || |||| || | || | |||||| ||||||||||| || | ||
Sbjct 386880 TTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGT 386822
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || || || || || || ||||||||
Sbjct 386821 TATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
>seq196
Length=158208
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || || ||||||||||| || || || | ||| |
Sbjct 147431 CTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 147490
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 147491 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 147550
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 147551 TCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATA 147610
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 147611 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 147646
>seq6
Length=41729
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 5897 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 5838
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 5837 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 5778
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 5777 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 5718
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 5717 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 5658
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 5657 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 5598
Query 123141 AAA 123143
|||
Sbjct 5597 AAA 5595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001013434520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |