Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq22 237 2e-57
seq4 113 5e-20
seq97 102 8e-17
>seq22
Length=276364
Score = 237 bits (262), Expect = 2e-57
Identities = 562/836 (67%), Gaps = 21/836 (3%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
||||| || ||| || | || || || || || || || || |||||||||||
Sbjct 269967 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 269908
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACG 132720
||| ||||| ||||||||| | ||||||| ||| || |||| ||| ||||
Sbjct 269907 TCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACCGA--AGG-CGACC 269851
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
| ||| ||||| || |||||||||| ||| || ||| ||| ||| | || |||
Sbjct 269850 AACAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGC 269791
Query 132781 AGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839
| | || || |||| || || || | | ||| ||||| |||| || ||||||||
Sbjct 269790 A-AGGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGAC 269732
Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899
||||| | ||| || | | |||| | | |||||| ||||| ||| || ||
Sbjct 269731 GATTTTCTCGACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGC 269672
Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959
||||||| ||||| || ||||| ||| | || | |||||| ||| ||||| |||||
Sbjct 269671 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGG 269612
Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019
||| | || | || || | ||| || |||| |||||| || || ||||| || ||
Sbjct 269611 CATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACC 269552
Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCC 133078
|||| || |||||| || || || | || |||||| || ||| | || | |||||
Sbjct 269551 TTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCGTCTTG-GATCC 269493
Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138
| | || |||||||||||||| || | || || || ||||||||||| ||||
Sbjct 269492 ATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTGAACA 269433
Query 133139 AACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196
| | | | || | | ||| | | |||||| ||||| | || || ||||
Sbjct 269432 A--GAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGGTTTC 269375
Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256
|| || | ||| || || |||||||| || ||||| || | | || || | |||
Sbjct 269374 GGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGATCTG 269315
Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316
|| || | |||| |||||||| ||||||||||| || |||||| |||||||||
Sbjct 269314 GACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGGCGAA 269255
Query 133317 AAAGGCCAGCACGTGCTT--GATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAG 133371
||||| || || ||| |||||| | ||||| ||||||| | | ||||
Sbjct 269254 GAAGGCAAGGAC--TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGTTCCAG 269197
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| | | |||||||||| || | |||||| | ||||| || || ||||||||
Sbjct 269196 TCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 269141
>seq4
Length=240824
Score = 113 bits (124), Expect = 5e-20
Identities = 522/816 (64%), Gaps = 23/816 (3%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT- 132683
|| || || || ||||| || || ||||||| ||| ||| ||||| ||||||||
Sbjct 6673 TTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT 6732
Query 132684 --GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||| ||| | |||| | |||| || | || | ||| |||||||| ||||||
Sbjct 6733 TCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CAACCAACAGTCTGTCGGCGACGAAC 6789
Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801
|| | |||||| ||| || || | || |||| | || || | || ||
Sbjct 6790 TCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC 6849
Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861
|| | | ||| || || | || || |||||||| |||| ||| || | |
Sbjct 6850 AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGG 6909
Query 132862 -CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
|| | ||| | |||||| ||||| |||||| ||||||||| ||||| || ||
Sbjct 6910 TCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTC 6968
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
||| || | || | ||||||| || || || |||||||| | || | ||||| |
Sbjct 6969 GTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAA 7028
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || |||| ||| || || || || ||||| || || | || || || || ||
Sbjct 7029 CCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAAC 7088
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
|| | || || ||| ||| || | || | ||||| | | |||||||||||||
Sbjct 7089 TAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCT 7147
Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCG 133156
| || || || || || | ||||| || ||||| || || | |||| |
Sbjct 7148 TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAG 7204
Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216
| | |||||| ||||| | || || |||| ||||| | || || ||
Sbjct 7205 GGTCCTTGATGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCA 7264
Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276
|||||| || ||||| || | | ||||| | || ||||| | ||| |
Sbjct 7265 TGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTT 7324
Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG- 133335
| |||| ||||| || || || ||||| |||||||||||||| || || || |
Sbjct 7325 CAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTGGA 7382
Query 133336 -ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391
|||||| | |||||| ||||||| | | |||||| | | ||||| ||||
Sbjct 7383 AATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAA 7442
Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| | || || ||||||| || || || |||||
Sbjct 7443 ATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 7478
>seq97
Length=405077
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || || || ||||| ||| | || |||||| | |
Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | ||||| || || ||||| | || ||
Sbjct 386843 GACACCATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCA 386901
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||| || | |||| || || ||||||||||| |||| | || || || |||||
Sbjct 386902 ACAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAA 386961
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || ||||| ||||| || | ||||||| ||
Sbjct 386962 CATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170380414080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |