Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq94 111 2e-19
>seq94
Length=65280
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|||||||| ||| |||| ||||| || || |||||||||||||| || || || |
Sbjct 28828 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 28887
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| || || ||||| || |||||||||||||| ||| || || || ||||
Sbjct 28888 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 28947
Query 158563 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
||| | | ||| | ||||| |||| |||||||| ||||| || | | | || |||||
Sbjct 28948 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 29006
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
||| ||||| ||||| || ||||| || ||||||||
Sbjct 29007 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 29046
Score = 102 bits (112), Expect = 1e-16
Identities = 179/258 (69%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939
|||| ||| | |||||||| || || || || ||||| || || ||||| | | |
Sbjct 28244 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 28303
Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
| || || || |||||||| ||||| ||||| || || |||| ||||||||||| |||
Sbjct 28304 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 28362
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
|||||||| ||| | || | |||||| | | | || | || || | || | |||
Sbjct 28363 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 28422
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAAT 158118
||||| || | || ||||||| || || || | ||||| ||||| | ||| ||||
Sbjct 28423 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 28482
Query 158119 TCTACAAGAGATAAGAAG 158136
| | ||| | || |||
Sbjct 28483 ATTTCCAGAAAGAAAAAG 28500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588048355302320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |