Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq196 185 2e-41
seq97 176 1e-38
seq82 172 1e-37
seq30 158 3e-33
seq12 158 3e-33
seq21 145 2e-29
>seq196
Length=158208
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||| | ||||||||| ||||| || ||||| || | | |||
Sbjct 147424 TCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 147483
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || ||||| ||
Sbjct 147484 TCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 147543
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||||||
Sbjct 147544 TTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAG 147603
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || ||||| || ||||| | ||||||
Sbjct 147604 GGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 147645
>seq97
Length=405077
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||||||| || | ||||||||| ||||| ||||| || || || || | | |||
Sbjct 387232 TCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGT 387173
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || || |||||||| || || || |||| |||||||||||||||||| ||
Sbjct 387172 TCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACC 387113
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||||||||| || |||||||| ||| || || || |
Sbjct 387112 TTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAA 387053
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | ||||||
Sbjct 387052 GGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 387011
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||||||| || | ||||||||| ||||| ||||| || || || || | | |||
Sbjct 386776 TCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGT 386717
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || || |||||||| || || || |||| |||||||||||||||||| ||
Sbjct 386716 TCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACC 386657
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||||||||| || || ||||| || || || || |
Sbjct 386656 TTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAA 386597
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || |||||||| || ||||| | |||||
Sbjct 386596 AGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386555
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||||||| || | ||| ||||||||||| ||||| || |||||||| | || ||
Sbjct 387004 TCTCAGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGT 386945
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||| ||||| || || || | | ||||| || |||||||| ||
Sbjct 386944 TCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACC 386885
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||||||||| || |||||||| ||| || || || |
Sbjct 386884 TTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAA 386825
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | ||||||
Sbjct 386824 GGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| | || | ||| ||||||||||| |||||||| || || || | | |||
Sbjct 387460 TCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGT 387401
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | | |||||||| |||||||||||
Sbjct 387400 TCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCC 387341
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||| || || || || ||| || || || || ||||| || || || || |
Sbjct 387340 CTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCGACCTCCAA 387281
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || || ||||| || ||||| | |||||
Sbjct 387280 AGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387239
>seq82
Length=49194
Score = 172 bits (190), Expect = 1e-37
Identities = 168/214 (79%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | ||||||||| | || | |||||| || ||||| |||||||| || | |||| |
Sbjct 41513 TCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-G 41455
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| |||||||| |
Sbjct 41454 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATAC 41395
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 41394 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCA 41335
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || ||||||||||| || ||
Sbjct 41334 AAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 41301
>seq30
Length=183202
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | || | |||||| || |||||||| ||||| |||| |||| |
Sbjct 32405 TCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-G 32347
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 32346 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 32287
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||| || ||||||||||| ||| ||| ||||| |
Sbjct 32286 CTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTA 32227
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| || | || || || |||||||| || |||||
Sbjct 32226 GAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32193
>seq12
Length=130387
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 12094 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 12036
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 12035 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 11976
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 11975 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 11916
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || || ||
Sbjct 11915 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11882
>seq21
Length=122314
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||||
Sbjct 93997 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 94056
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || |||||| || || || || ||
Sbjct 94057 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACC 94116
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 94117 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 94176
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 94177 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 94209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109476098704829
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