Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4 156 5e-33 >seq4 Length=240824 Score = 156 bits (172), Expect = 5e-33 Identities = 359/537 (67%), Gaps = 9/537 (2%) Strand=Plus/Plus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| || |||||||| || || |||||||| ||||||| |||||||| || ||| Sbjct 6934 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 6993 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 |||||||| || ||||| | |||||| ||||| | ||| || || | ||||| || || Sbjct 6994 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 7053 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || | |||||||| | ||||| || || || | | ||| || | | Sbjct 7054 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 7113 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC---AATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 7114 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTT---CTCACCGATTTCTGGGATGGTG 7170 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | || | |||||| | || | || || ||||| || | Sbjct 7171 TGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAAC 7230 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || |||||||||||||||||||||| || || ||||| || |||| | | Sbjct 7231 AAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTT 7290 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | ||| || ||| | | || | | | | |||||||||||||| || || Sbjct 7291 GCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 7350 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| || ||| ||| || | | || || Sbjct 7351 TCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATT 7410 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || ||||| |||| ||||| || || ||||||| ||| ||| ||||||| ||| Sbjct 7411 CTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 7467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592313934667480