Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq214 163 1e-35
seq6 123 1e-23
seq84 120 2e-22
seq13 93.3 2e-14
>seq214
Length=210230
Score = 163 bits (180), Expect = 1e-35
Identities = 321/473 (68%), Gaps = 4/473 (1%)
Strand=Plus/Plus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| |||| | |||| || || || ||| || | |||||||| |
Sbjct 7478 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACC 7537
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | ||| |||||||||||||| | |||||||| || |||||||||||| | |
Sbjct 7538 CATAGAGCAGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 7597
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| |
Sbjct 7598 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 7657
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || |||||||| || || || | ||||| | ||||| || | ||| |||
Sbjct 7658 CTCTTGTTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 7717
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| ||| || | ||| |||||||| | | ||| | || || || | | ||| | |
Sbjct 7718 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 7777
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249
|| ||| | ||| || || ||||| ||| ||||| ||||| || | ||| |
Sbjct 7778 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAA--G 7835
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
||||| |||| |||| ||| |||| | |||||| | | ||| ||||| || || | ||
Sbjct 7836 TATCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTT 7895
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | || ||||| || || | ||||||||| | |||
Sbjct 7896 GAGGCTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTAT 7948
>seq6
Length=41729
Score = 123 bits (136), Expect = 1e-23
Identities = 311/473 (66%), Gaps = 0/473 (0%)
Strand=Plus/Plus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| ||||||| ||| |||||| || || || ||| || | ||| ||||
Sbjct 5264 TTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAA 5323
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | ||| || |||||||| || | ||||| ||||| ||||| ||||| | |
Sbjct 5324 TCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAA 5383
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||| ||||| | ||||||||||| | || | ||||| |||
Sbjct 5384 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 5443
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | ||||| | ||||||||| | ||| |
Sbjct 5444 GTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAG 5503
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | ||| |||||||| | | ||| | || || || || | ||| |
Sbjct 5504 GAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 5563
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
|| ||| | ||| || |||||||| ||| ||||| ||||| || | |
Sbjct 5564 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGG 5623
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 5624 TGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTT 5683
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | ||| || || || || | || |||||| |||||
Sbjct 5684 GAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATAT 5736
Score = 89.7 bits (98), Expect = 3e-13
Identities = 317/492 (64%), Gaps = 14/492 (3%)
Strand=Plus/Plus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
||||| | ||| ||||| || || |||||| ||||||||| |||||||||||||| |
Sbjct 4090 GTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTT 4149
Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGG-CAA-- 24811
|||||||| | || ||| | ||| ||||| |||| || |||| ||| |||
Sbjct 4150 GTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGAGATTGATCAATA 4209
Query 24812 ---ACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAA 24868
||| |||| ||| || || | || |||||| || || || || || ||
Sbjct 4210 TAGACAGAACG------ATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAA 4263
Query 24869 GCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCA 24928
| || |||||| || || | || ||||| | ||| | ||||| || |||
Sbjct 4264 ACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATGGAGCCA 4323
Query 24929 TTTTCTCTCAATAGATTCAATCTCATATTCGGTGTCCAAAGAT-TAATTTTTTCAAGATC 24987
|||| | | | |||| | | ||||| | ||||| | ||| | |||| ||
Sbjct 4324 TTTTGTGTAATCAGATACTGTTTCATACCCTCATCCCAAATACCTAAATCAACCAAG-TC 4382
Query 24988 TCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA 25047
| | |||| || | | ||||| || || || || | | | |
Sbjct 4383 ACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACGGGAGTACAT 4442
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|| ||||||| |||||| ||||||||||||| || || ||||| || || ||||| ||
Sbjct 4443 ATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGT 4502
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
|||||| ||| || | |||||||| | ||||| || | || |||| | ||||
Sbjct 4503 AGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTTCTTAA 4562
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 4563 GGTGTCCCAATC 4574
>seq84
Length=143485
Score = 120 bits (132), Expect = 2e-22
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Plus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || | ||| |||||||| | ||| || |||||||| || | ||||||||
Sbjct 132075 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 132134
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|| || ||| ||||| | | ||| | || || || || |||| |||||||| || ||
Sbjct 132135 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 132194
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
| | ||||| ||| ||| || |||||||| || ||||| | |||||| |
Sbjct 132195 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 132254
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
||||| || | ||| |||| || || ||||| ||||| || | ||| |
Sbjct 132255 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 132314
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
|| ||||| || | ||||| || ||||| ||| | ||||| || || |||||
Sbjct 132315 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 132374
Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289
||||| ||| | || ||| |||| |||| ||| || | ||||| | |
Sbjct 132375 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 132434
Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349
| ||||||||||| | ||| | ||| | || || | |||||||| ||| || | |||
Sbjct 132435 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 132494
Query 26350 ATGAGTATAATATC 26363
|| || | ||||
Sbjct 132495 GTGGGTGAAGTATC 132508
>seq13
Length=149500
Score = 93.3 bits (102), Expect = 2e-14
Identities = 162/229 (71%), Gaps = 10/229 (4%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|||||| || | |||||| ||||||||||||| || | ||||| ||||| || || ||
Sbjct 45561 GTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGT 45620
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| ||| || | || ||||| || |||| ||||||||| || | | ||||
Sbjct 45621 TGGCATTGGTGCCATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAA 45680
Query 25168 TTTATCCCAATCTAAATTATTATCTAACTCG-ATATCGTTATCATATAAATCAAATTGTA 25226
| |||||||| | | | || | | || |||| || || ||| |||||||
Sbjct 45681 GGTTTCCCAATCCCACAT----GCCAAATGGTTTAGCGTT-CCACAT--ATCGAATTGTA 45733
Query 25227 ACAATCCACTT-GCTGCAGGCGATTGATCAAAAGTTGAATATTTACCTT 25274
| ||| | ||| | || || || |||||||| |||||||||||||
Sbjct 45734 A-AATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTT 45781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038806521025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |