Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq94 129 7e-25 >seq94 Length=65280 Score = 129 bits (142), Expect = 7e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || ||||| ||||| |||||||| || | | |||| ||||| |||||| Sbjct 29036 AGGGCTTGAGCGGTGCAAATGTTTGAAGTTGCTTTATCACGTTTAATGTGCTGTTCTCTA 28977 Query 139371 GTTTGTAGTGCTAATCTGTATG-CAGGATTGCCTTCGCTGTCCACTGACTGACCTACAAT 139429 ||||||| ||||| | ||| | ||||||| ||| || |||| || ||| ||||| Sbjct 28976 GTTTGTAAAGCTAAAC-GTAGGGCAGGATTACCTAGGCGGTCCTTGGAGATACCAACAAT 28918 Query 139430 TCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACC 139489 ||||||||| || ||||| || || || | || || || |||||||||||||| Sbjct 28917 TCTGCCAGGAATTTTTCTGTTCAGTTTATCAATAACGGCGAAAAAGGCAGCATGAGGACC 28858 Query 139490 TCCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| |||| ||| |||||||| Sbjct 28857 ACCATAACCCATTGGAACACCGAACCTTTG 28828 Score = 107 bits (118), Expect = 2e-18 Identities = 180/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 139826 CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTC 139885 ||| || | ||| | | |||| ||| | ||||| || || | || || || |||| Sbjct 28500 CTTTTTCTTTCTGGAAATATTAAATGACAGTAGCATAGCTTCACCAGCCGCGGTACCTTC 28441 Query 139886 ATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTA 139945 ||| || | || |||||||| | || || || || | || | | | |||||| | Sbjct 28440 ATCCAACAATGAGGCGTTTGCCACAGGCAAACCAGTCAAATCGGAAACTACTGTTTGGAA 28381 Query 139946 ATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGT 140005 || | ||| ||||||||||| ||||||||||| |||| || || ||||| ||||| || Sbjct 28380 GTTTAGTAATGCTTCCAATCTACCCTGAGATATTTCAGGCTGGTATGGAGTATAAGAAGT 28321 Query 140006 GTACCA-ACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064 |||||| || || || || | | ||||| || || ||||| || ||| || || | Sbjct 28320 GTACCATTCTGGGCTT-TCCAATAGGTTTCTTTGAATAACTGGCGGCAAAATCGTGCCGT 28262 Query 140065 AGTATCCTTGACCTATAA 140082 ||||||| | ||| |||| Sbjct 28261 AGTATCCCTTACCAATAA 28244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995599095240