Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6 320 2e-82 seq214 239 5e-58 >seq6 Length=41729 Score = 320 bits (354), Expect = 2e-82 Identities = 915/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Minus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 5810 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 5751 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 5750 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 5692 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 5691 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 5632 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 5631 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 5572 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 5571 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 5512 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 5511 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAA 5452 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| ||||| | || | Sbjct 5451 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATT 5393 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 5392 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 5334 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 5333 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 5274 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 5273 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 5215 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 5214 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 5158 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 5157 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 5098 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 5097 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 5038 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 5037 TGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGC 4978 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 4977 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 4921 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 4920 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 4861 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 4860 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 4801 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 4800 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 4741 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 4740 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 4681 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 4680 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 4623 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 4622 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 4564 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATG 76519 || ||| || | |||| | || | ||| || | | | || || |||||||||||| Sbjct 4563 CTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATG 4506 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | Sbjct 4505 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCC 4446 Query 76580 AACATCTAC 76588 || || ||| Sbjct 4445 AATATGTAC 4437 >seq214 Length=210230 Score = 239 bits (264), Expect = 5e-58 Identities = 897/1385 (65%), Gaps = 40/1385 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || | ||||| | ||||| | || || ||||| ||| ||||||| | | Sbjct 8037 CCACAGCACTTAATCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCT 7978 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || || || || || ||||| | || || || | ||| || | ||||| | || Sbjct 7977 TTAGAAACCTATAACTTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTATT 7919 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| |||| || || |||||| || ||| | | || | ||||| || Sbjct 7918 CAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGA 7859 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | ||||| || | ||| | | ||| ||||| || || || ||||| Sbjct 7858 TTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGG 7799 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || ||||| | | | || | ||| ||| || ||||| Sbjct 7798 AGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAA 7739 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| || || || ||||| Sbjct 7738 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGT 7679 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | || | || ||||| |||||||| Sbjct 7678 TGACCAAGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 7622 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 7621 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 7563 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || | | || ||| ||||||| |||||||||||||| || || || Sbjct 7562 CGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAAA 7503 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| || ||||| | ||| ||| Sbjct 7502 ACGGCACTTGGACTTTATTCTCTCCT-ACATCTGCCCCAGGCTTGAGTGACTGTTACGGT 7444 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || || |||||||| || || || ||| | || ||| | | || |||| | Sbjct 7443 GATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTGGTAA---GACTAT- 7388 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||||| Sbjct 7387 CAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACCATT 7328 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 7327 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 7268 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || ||| | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 7267 GTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTGTTTG 7208 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAG------AGACTCG 76089 || ||||| || | || | ||| | ||| || ||||| | ||| Sbjct 7207 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 7148 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | |||| || |||||||| | || || |||| || ||||| Sbjct 7147 TACATACAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATTACTCGTAACTTAAACAA 7088 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| |||| || Sbjct 7087 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACATAG 7028 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 7027 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTGCCATT 6968 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || ||||| |||| || | | | ||| || ||||| ||||| || || || || | Sbjct 6967 CGACTCAGAAGAAG-CACGCTTACTAAATATTCAAATCTTCGAAACTATCTACCATGCCT 6909 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || ||||||||| ||| || | || | || || || ||| | || | Sbjct 6908 CCATGGAAGCTTCTTGTGAATTAGCTCAAAGAGATGGCCCATACGAAACCTTTAAAGGCT 6849 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA-AGCTCAAC 76447 | || || || ||||| | ||||| || || ||||||| | |||||| | | Sbjct 6848 CCCCGGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACCAAAAACCATACGGTATG 6790 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT-- 76505 | || ||||| ||| | | ||||| |||| | ||| || | ||| ||||| Sbjct 6789 TGGGATTGGGACACTCTGAGAAATAACATCATGGAGCATGGTATTAGAAAC--TCTTTGA 6732 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 |||||||| ||||| || || ||||| | || ||||| ||| | || || || || | Sbjct 6731 CCATGGCACCTATGCCTACTGCATCCACATCTCAGATCTTAGGTTACAACGAGTGTTTCG 6672 Query 76566 AACCA 76570 ||||| Sbjct 6671 AACCA 6667 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||| ||||||||||||||| |||| | || |||||||| || ||||||||| Sbjct 117761 GGCGCCAAAATCCCCCGAGGCGCCATTCTTTCCGGGCCTCCAGGTACCGGTAAGACCCTC 117820 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 | ||| |||| |||||| || | || || || ||| | | ||| |||| | | Sbjct 117821 TTGGCCAAGGCCACCGCGGGCGAGGCCAACGTGCCCTTCTTTTCCGTG-TCTGGTTCCGA 117879 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGC 175424 || ||||| ||||||||||| |||||||| Sbjct 117880 GTTCGTGGAAATGTTTGTTGGGGTGGGTGC 117909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566714094560