Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq22 154 2e-32
seq97 125 1e-23
seq30 122 1e-22
seq196 120 4e-22
seq82 114 2e-20
seq21 111 2e-19
seq12 107 3e-18
>seq22
Length=276364
Score = 154 bits (170), Expect = 2e-32
Identities = 373/557 (67%), Gaps = 13/557 (2%)
Strand=Plus/Minus
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
|| ||||| ||||| || ||||| |||||||| |||||| | || || ||||| ||
Sbjct 269682 AACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAG 269623
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|| ||||||||||| |||||||| || || | ||| || || || ||||| | ||
Sbjct 269622 GTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAG 269563
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATT 18330
||||| | ||| || | | ||||||| || | || ||||||| | || | | | |
Sbjct 269562 AAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCG 269503
Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390
|| | |||||| | | |||||||| | | || || || | || ||
Sbjct 269502 TCT-TGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGAT 269444
Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
|| || ||||| || |||| || | ||| || || || || ||||| ||||| ||
Sbjct 269443 GGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGA 269384
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATA-AAACGATCTAGCCT 18509
|| |||| ||||| ||| |||| ||||| || || |||| || |||| ||| | ||
Sbjct 269383 GTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAAC--TCTTGGCT 269326
Query 18510 --CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTC 18567
|||||| || | |||| | | || | || ||||| || || || || ||||||||
Sbjct 269325 TCCGGGAT-CTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTC 269267
Query 18568 AGCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA--- 18623
| | ||||| || || | || | || | ||||| |||| || || || |
Sbjct 269266 GGAGGCGGCGAAGAAGGCAAGGAC-TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTC 269208
Query 18624 GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683
|||||||| |||| ||||| || || | ||| | ||| || | ||||| ||||| |
Sbjct 269207 TGTTGTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGG 269148
Query 18684 ATTCGGCCTGTTTGTAC 18700
||||| | ||||||
Sbjct 269147 CCTCGGCACGCTTGTAC 269131
>seq97
Length=405077
Score = 125 bits (138), Expect = 1e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || || || || || || ||||| || || ||||| ||
Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || | ||| ||||| |||||||| ||||| ||||| || |||
Sbjct 387299 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387358
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| |||||||||||| || ||||| ||||||||| || || |||||
Sbjct 387359 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387418
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| ||| | || || || || || ||||| ||||||| ||
Sbjct 387419 AT-TCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGG 387465
>seq30
Length=183202
Score = 122 bits (134), Expect = 1e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| ||||| || || ||||||| ||| |||||| | ||| |
Sbjct 32197 TTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 32256
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || ||| || || ||||| |||||||| || || || || |||||||||||||| |
Sbjct 32257 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 32316
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014
||| |||||||| | ||||| ||||| || || || || || || || ||| ||
Sbjct 32317 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 32375
Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | |||||||| || ||||| ||||| |||
Sbjct 32376 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 32411
>seq196
Length=158208
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 147648 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 147589
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| || || || ||| || ||||| || ||||| || || || ||
Sbjct 147588 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 147529
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | ||||| ||||||||| || || ||
Sbjct 147528 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 147469
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| | || | || || || || ||||| ||||| ||||
Sbjct 147468 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGTG 147417
>seq82
Length=49194
Score = 114 bits (126), Expect = 2e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| |||||||| || || || || || ||||| ||| |||||| | |||
Sbjct 41301 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 41360
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || ||||| || |||||||||||
Sbjct 41361 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTA 41420
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || | |||||||||
Sbjct 41421 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ATATCCAAA 41478
Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | |||||||| || ||||| ||||| |||
Sbjct 41479 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGT 41519
>seq21
Length=122314
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 94205 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 94146
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 94145 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCT 94086
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
||| |||||||| | ||||| |||||| |||| || || || || ||||| ||
Sbjct 94085 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACAT--CCAAAAGGA 94028
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 94027 ATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 93991
>seq12
Length=130387
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 11882 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11941
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 11942 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 12001
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 12002 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 12061
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 12062 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 12100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731868459569200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |