Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq214 244 3e-59 seq6 181 3e-40 seq13 147 6e-30 seq84 122 3e-22 seq74 116 1e-20 seq93 93.3 1e-13 seq205 86.0 2e-11 seq206 84.2 6e-11 >seq214 Length=210230 Score = 244 bits (270), Expect = 3e-59 Identities = 620/934 (66%), Gaps = 12/934 (1%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645 ||| ||| |||| ||||| || |||||||| | || | | |||||| ||||| ||| Sbjct 7191 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCAGA-GTATTCAACAATTTCA 7249 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 ||||||| ||||| |||||| || || ||||| ||||| ||||| ||||||||| Sbjct 7250 CAGCACAAATTAGATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 7309 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 ||||||||||| | || |||| || || || ||| | ||||| |||| || | Sbjct 7310 GCATCCTTGTAAACAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTAC 7369 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATAC 155825 || | | |||| || || ||| | ||||| || || |||| Sbjct 7370 CATAATTTTTGGGCCTTGATAGTCTTACCA---CGACCTTCTTTTTCGTAACGGGTATAT 7426 Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG-CACTTATCGGGGCAAAA 155884 || | | | | || ||||||||||| ||||||| || ||| || | | || | | || Sbjct 7427 AGGGCTTCGAATTCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGTAGGAG-AGAA 7485 Query 155885 CAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGC 155944 | | |||| | || | ||||||| ||| || | ||| |||| | ||| Sbjct 7486 TAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGC 7545 Query 155945 ATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAA 156004 | ||| | || || || || || | ||||||||||| | | || | ||| Sbjct 7546 AGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAA 7605 Query 156005 TTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG-- 156062 || ||||||| || |||||||| ||| | |||||| |||| |||||| Sbjct 7606 GTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTT 7665 Query 156063 -CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 ||||| || || ||||| || ||||| || |||||||||| | ||||||||| | || Sbjct 7666 ACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCC 7725 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATG 156181 || ||||| || || || || ||| | || || | || |||| || || ||||| Sbjct 7726 GTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATG 7785 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 ||| |||||||| || | ||||||||| ||| |||||||| | ||||| | |||| Sbjct 7786 TAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAAT 7845 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGG 156301 ||||||||| |||||||| | ||||| | || | || || | |||||| ||| Sbjct 7846 ACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGG 7905 Query 156302 TGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATC 156361 || ||||||||||||| || || | |||||| |||| || || |||||| | | Sbjct 7906 AGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTT 7965 Query 156362 GTATGTCTCCTTAATC-TTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCC 156420 || || | || || | ||||| || |||||||||| | | ||| ||||| Sbjct 7966 ATAGGT-TTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGA 8024 Query 156421 ACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCA 156480 | ||||| ||||| || ||| || | |||| || | ||| | ||||||| Sbjct 8025 TTAAGTGCTGTGGACGTTCAGCAACTTGACCGTTGATTCTCAATAAGTAAGAACGTTCCA 8084 Query 156481 GAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514 |||||| || ||||| ||| | || |||| || Sbjct 8085 AAGTTTTGAAACCGAAGTAACTATACTGAAAGTC 8118 >seq6 Length=41729 Score = 181 bits (200), Expect = 3e-40 Identities = 482/732 (66%), Gaps = 12/732 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| |||||||| | ||| || ||||||| ||||| || || || || Sbjct 5022 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 5081 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 |||||| |||||||||||||||||||| | || | | || || || || || | || || Sbjct 5082 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 5141 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| ||| ||| | | |||| |||| | || || | ||||| Sbjct 5142 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 5196 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866 ||| || |||| || | | || |||||||||||||| || | ||||| Sbjct 5197 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 5256 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | | || | | || | | ||| | ||| | ||||||| ||| || | Sbjct 5257 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 5315 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 |||| ||| | |||| ||| | || ||||| ||||| | ||||| || Sbjct 5316 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 5375 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||||| | || | || || ||||||| ||| ||| ||||| || | ||||| Sbjct 5376 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 5435 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || || |||||||| || ||||| || ||||| |||||||| |||| Sbjct 5436 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACG 5495 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 | ||||||||| | ||| || ||||| || || || || ||| | ||||||| ||| Sbjct 5496 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 5555 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 |||| ||||| |||||||| ||||||||||| | ||| ||||| ||| ||||| Sbjct 5556 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 5615 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||| | || | | |||| || || ||||| || || | ||| | | | | || || Sbjct 5616 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 5675 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | ||||||| ||| || || || ||||| | || || | || ||| ||||||| Sbjct 5676 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 5735 Query 156344 CTTATTAGACAT 156355 || |||||| Sbjct 5736 TTTTAGAGACAT 5747 >seq13 Length=149500 Score = 147 bits (162), Expect = 6e-30 Identities = 209/290 (72%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || |||||||| || ||||| || ||||| |||||||| |||| | ||||||||| | Sbjct 46570 TTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAAC 46629 Query 156120 CCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 || || ||||| || ||||| || |||| ||| ||||| | || || | || | || Sbjct 46630 CCGTTTGAAGTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGAT 46688 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238 ||| || |||| |||||||| ||| ||||| ||| ||||| || | ||||| | Sbjct 46689 ATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATA 46748 Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298 ||||||||| ||||| ||||| | ||| | | || | || ||| | |||||| | Sbjct 46749 AATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATG 46808 Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 |||||| ||||||||||||| || || | || ||| | || || |||| Sbjct 46809 TGGTGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 46858 >seq84 Length=143485 Score = 122 bits (134), Expect = 3e-22 Identities = 291/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||| || || || || || ||||| || |||||||||| | ||| ||||| | Sbjct 132223 TTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAAC 132282 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || ||||| || ||||| || ||||| || || | || |||| ||| | ||| Sbjct 132283 CCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATA 132342 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || || |||| |||||||| || ||||| || || || || | ||| | | || Sbjct 132343 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAA 132402 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||||||||| || || || | ||| | | || | || ||| | |||||| || Sbjct 132403 ATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGT 132462 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || || || || |||||||| || | || || | || || | ||||| | Sbjct 132463 GGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAG 132522 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 | ||| |||| | | ||| | || |||||||||| | | || | ||| Sbjct 132523 TTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATG 132582 Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479 || ||| || ||||| || | | | || || | || || ||||| | |||||| Sbjct 132583 ACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCC 132642 Query 156480 AGAGTTTTAAACCCGAAATA 156499 ||||| |||||||| ||||| Sbjct 132643 AGAGTCTTAAACCCAAAATA 132662 >seq74 Length=120495 Score = 116 bits (128), Expect = 1e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| | || ||| || ||| || ||||| | | |||| ||||||||| Sbjct 82359 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 82300 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| || |||||| ||||| ||||| || ||||| ||||||||||| Sbjct 82299 TGAATATAACCTGTTTCAGCTGTTTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 82240 Query 302659 ATAGCATGGAAGAATAGCTCTT 302680 || ||||||||||| | ||||| Sbjct 82239 ATTGCATGGAAGAAAAACTCTT 82218 Score = 95.1 bits (104), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | | ||| || ||||| || || || |||||| || |||||||| || Sbjct 83098 AATTTCCTTTAAACGCGGGACACCGGAAGTGACTTT---CTTGGAAGCCACACCAGCGAA 83042 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 |||||||||||||| || | ||| |||| ||||||||| ||| ||| || |||| | Sbjct 83041 ATGGAAAGTATTCAGTGTCATTTGTGTAGCTGGCTCACCGATAGATTGAGCTGCAAGAAC 82982 Query 301935 ACCAACCATTTCTCCTGG 301952 |||||||||||| || || Sbjct 82981 ACCAACCATTTCACCAGG 82964 >seq93 Length=332463 Score = 93.3 bits (102), Expect = 1e-13 Identities = 216/325 (66%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 ||||| ||||||| | || | | | |||| |||||||| || |||||||| Sbjct 173506 GCCAAGACAACAACATGATCAGCTGGAGTAAAGCCATCCATTTCCACCAACATTTGATTT 173565 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| | ||| ||||||||||| | ||| ||| ||| | || ||| Sbjct 173566 AATGTGTTTTCTCTTTCATCATTAGCGCCTGAAAAATTACC---TTTTTGTCTAGCTTTC 173622 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || | |||||||||||||||||| || | | | |||| |||| ||| ||| || Sbjct 173623 CCGATAGCATCAATTTCGTCAATAAACACGATCGAAGGAGCGTTTTCTCTTGCAGTTTTG 173682 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| || Sbjct 173683 AACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACCG 173742 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || || | ||||| || || || ||||| |||| |||| || | || ||| Sbjct 173743 GAAACAAAATAGAATGGGACGCCGGCCTCACCTGCAGTTGCCTTCGCAAGCAAGGTTTTA 173802 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATA 289234 || || || ||||| || ||||| Sbjct 173803 CCGGTACCTGGTGGACCAGATAATA 173827 >seq205 Length=56095 Score = 86.0 bits (94), Expect = 2e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||||| ||| || | |||||| | |||||||||||| | | |||||||||||| | Sbjct 6117 GCACCGTAAGCGATGACACAATCTCTTTCCATTTCACCTAATCTCAGACCACCATCTCTG 6058 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 || ||||| | | | |||||| || | |||| || ||||| | || | | Sbjct 6057 GATCTACCTTCGGTAGGTTGACGCGTCAGGACAGCCCTAGGACCACGGGCTCTTGCGTGC 5998 Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452 |||||||| ||||||||||||| | | ||||||| || |||| ||| | | | Sbjct 5997 ATTTTATCCAAGACCATATGCTTCAATTTTTGATAATAAATTGGCCCAAAAAAGATATAT 5938 Query 233453 GCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTACCCGA 233502 || ||||| ||| || | | |||| ||| || | || ||||| || Sbjct 5937 GCCTGTAAACATTCACCCGTTATACCGGAGTACAACATATCTTTACCTGA 5888 >seq206 Length=407341 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || | |||||||||| ||||||||||| |||||||| || | || || | Sbjct 56570 TGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGAACGATA 56511 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || || || || ||||||| ||| || | ||| || | |||||||| |||||||| Sbjct 56510 CCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTTG 56452 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 || ||||||||| ||| || ||||| || Sbjct 56451 ACCATGACGAGAAGCGAATTTGTCACCGAT 56422 Score = 84.2 bits (92), Expect = 6e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318 ||||||||| | |||||||||||| |||||||||||||||||||||||||| | | | Sbjct 56938 TTAAAAATGAAGCAGCACCGTGAGCGATCATACAATCACGTTCCATTTCACCGAATCTTA 56879 Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAAC 233364 |||||| || | || ||||| | || | || | |||||||| Sbjct 56878 AACCACCGTCTCTCGATCTACCTTCCACCGGCTGTCTTGTTAAAAC 56833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810302084419