Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq97 123 2e-23
seq196 118 8e-22
seq12 93.3 3e-14
seq30 82.4 6e-11
>seq97
Length=405077
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| |||||||| || || |||||||| | || ||| | |
Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | ||||| ||||| |||||||| ||| | || ||| ||
Sbjct 387299 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387358
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| ||||| || ||||| |||| || ||| || ||||||| |||
Sbjct 387359 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387418
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786
|||||||||||||| || ||||| |||| | ||| | |||| || |||
Sbjct 387419 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAAT 387469
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || ||||| || | || || || ||||| ||| | || ||| ||
Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || |||||| || || ||||| | || ||||||
Sbjct 386843 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 386902
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| |||||||||||||| |||| || ||| || | || ||||||
Sbjct 386903 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 386962
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| ||||||||||| || ||||| |||| |||||| || |||| ||
Sbjct 386963 ATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| ||||| || || || |||||||| | || ||| | |
Sbjct 386555 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 386614
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || |||||| || || ||||| | || || ||
Sbjct 386615 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 386674
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||||| |||| ||| ||||| || |||||||| | | ||| || | ||||| |||
Sbjct 386675 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 386734
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| |||||||||||||| | ||| |||| |||||| || |||| ||
Sbjct 386735 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 386781
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || ||||| || | || || || ||||| ||| | || ||| ||
Sbjct 387011 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 387070
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || |||||| || || ||||| | || || ||
Sbjct 387071 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 387130
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||||| |||| ||| ||||| || |||||||| | | ||| || | ||||| |||
Sbjct 387131 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 387190
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| |||||||||||||| | ||| |||| |||||| || |||| ||
Sbjct 387191 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 387237
>seq196
Length=158208
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| ||||| |||||||| || || || |||||| | ||| || ||
Sbjct 147648 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 147589
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| ||| | | | | || || |||||| || || ||||| | || ||
Sbjct 147588 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 147529
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || |||| |||| || ||| || | ||||||
Sbjct 147528 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 147469
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||||||||| || || ||| |||| ||||||||| |||| ||
Sbjct 147468 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 147419
>seq12
Length=130387
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623
||||||||| ||||| || || || ||||| || | ||| || || || ||| |
Sbjct 11881 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 11940
Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683
| | | || || ||||||| || || ||||| | || || || || ||| |
Sbjct 11941 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 12000
Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743
|| | ||| ||||| || |||| |||| | ||| || | |||||||||||||||||
Sbjct 12001 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 12060
Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || |||||| | || ||||||||| |||| ||
Sbjct 12061 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12099
>seq30
Length=183202
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 107565 TTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTC 107624
|| || || ||||| || || |||||||| || | ||| || || || || |
Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252
Query 107625 GGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTT 107684
| | | || ||| |||||| || |||||||| | || || || || ||| |
Sbjct 32253 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32312
Query 107685 ATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAG 107744
|| | ||| ||||| || |||| |||| | ||| || | ||||||||||||||||||
Sbjct 32313 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32372
Query 107745 GAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || || || | || ||||||||| |||| ||
Sbjct 32373 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398874918672643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |