Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq21 109 9e-19 seq12 107 3e-18 seq97 100 4e-16 >seq21 Length=122314 Score = 109 bits (120), Expect = 9e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 146040 TTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATT 146099 ||| | || || || || || || || || ||| | || || ||| | || || ||| Sbjct 94209 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 94150 Query 146100 CAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTC 146159 | ||||| || || || ||| || ||||| || ||||| |||||||||||| | Sbjct 94149 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTG 94090 Query 146160 ATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAA 146219 || ||||| ||||| ||||| || || |||||| || | || || || || ||||| Sbjct 94089 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 94030 Query 146220 GAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||||| ||| | ||||| || || |||||||||| |||| Sbjct 94029 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTA 93990 >seq12 Length=130387 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 11888 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 11947 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 11948 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 12007 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 12008 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 12067 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 12068 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 12101 >seq97 Length=405077 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || || || |||||| | || || || || Sbjct 386556 TGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTGGAGGTCGAGTCCTCCG 386615 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || || || ||| || ||||| ||||| || || |||| Sbjct 386616 ACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 386675 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| ||||| ||| | || ||| |||||| || |||| ||||| | Sbjct 386676 AAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAACA 386735 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| || || ||| | || || || || || | ||||| |||| Sbjct 386736 TCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGGTA 386783 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || ||||| ||||| || || ||||||||||| |||||||| ||||| ||| | || ||| Sbjct 387107 AAGGAAGGTATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGAT 387166 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||| || |||| ||||| || ||||| || || ||| | || || || || || Sbjct 387167 GGTAGAACTTTGTCAGACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGA 387226 Query 146247 TTAAGAGGAGGTA 146259 | ||||| |||| Sbjct 387227 CTGAGAGGTGGTA 387239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162596920040