Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq30 100 3e-16 seq82 96.9 3e-15 seq12 91.5 1e-13 seq97 84.2 2e-11 >seq30 Length=183202 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| |||||||| | || ||||| ||||| |||||||| ||| | Sbjct 32410 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 32351 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 32350 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 32291 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 32290 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 32231 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | ||| | || || || ||||| || || ||||| Sbjct 32230 TCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32193 >seq82 Length=49194 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | |||||||||||| | || ||||| ||||| || ||||| || | Sbjct 41518 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 41459 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||| ||||||||| |||| | | ||| || || ||||| Sbjct 41458 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGA 41399 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 41398 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 41339 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | ||| | ||||| || ||||| ||||| || || Sbjct 41338 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 41301 >seq12 Length=130387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| ||||| || | || ||||||||||| |||||||| || | Sbjct 12099 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 12040 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 12039 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 11980 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 11979 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 11920 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | ||| | ||||| || ||||| || || || || Sbjct 11919 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11882 >seq97 Length=405077 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || || || | || || || ||||| ||||||||||| || || || ||| Sbjct 386995 CAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTC 386936 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| || |||||||||||| | |||| | || ||||| ||||| || ||||| ||||| Sbjct 386935 TTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC 386876 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 ||| || || | | || | ||||| | | || || || | || | || Sbjct 386875 TTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGT 386816 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||| || |||| ||| || ||||| ||||||||| Sbjct 386815 CTTACCAGTCAGTGTCTTGACGAAGATTTGCATA 386782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488541636668400