Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq82 123 6e-23 seq97 120 7e-22 seq12 120 7e-22 seq196 107 5e-18 seq30 104 6e-17 seq21 95.1 3e-14 >seq82 Length=49194 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| | || || || || |||||||||||||| ||| ||||||||| | Sbjct 41300 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41359 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| ||| || ||| |||||| | Sbjct 41360 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 41419 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || ||||| |||| || Sbjct 41420 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAA 41479 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || ||| | || | ||||||||| Sbjct 41480 GGAATCCACTTTACATTTAGTTTTGAGA 41507 >seq97 Length=405077 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || || || || || ||||||||| |||| Sbjct 387025 CAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGACACCATCGACAA 387084 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| || ||| |||||||| || || Sbjct 387085 CGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGACTGATTTT 387144 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| |||| ||||| || |||||| | || || ||| |||| || ||||| Sbjct 387145 TGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAACATCCAAAAGGAGTC 387204 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 |||||||||| | || |||||||| Sbjct 387205 TACTCTTCACTTGGTCTTGAGACT 387228 Score = 118 bits (130), Expect = 3e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || |||||||| || || || ||| Sbjct 386558 CAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTGGAGGTCGAGTCCTCCGAC 386617 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 386618 ACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 386677 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| || || || || ||||| |||| ||||| || |||||| | || || ||| || Sbjct 386678 AGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAACATC 386737 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||||||||| | || |||||||| Sbjct 386738 CAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACT 386772 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || || || || || ||||||||| |||| Sbjct 386797 CAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGACACCATCGACAA 386856 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| ||||| || || | || || Sbjct 386857 CGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAACAGAGGTTGATTTT 386916 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || ||| ||||||| || || || || | ||||||||| |||| || ||||| Sbjct 386917 TGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAACATCCAAAAGGAGTC 386976 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 ||||| ||| | || |||||||| Sbjct 386977 CACTCTGCACTTGGTCTTGAGACT 387000 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 |||||||| || | ||||||||||||||| || |||| |||||||| | |||||| || Sbjct 386772 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTA 386713 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||| ||||| || || || || || | |||||| Sbjct 386712 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTG 386672 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 |||||||| || | ||||||||||||||| || |||| |||||||| | |||||| || Sbjct 387228 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTA 387169 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||| ||||| || || || || || | |||||| Sbjct 387168 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTG 387128 >seq12 Length=130387 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||||||||| | Sbjct 11881 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 11940 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 11941 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 12000 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || |||||| | || || Sbjct 12001 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 12060 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || ||| | ||| | || |||||| Sbjct 12061 AGAATCCACTTTGCACTTAGTCTTGAGA 12088 >seq196 Length=158208 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || | ||||| ||| ||| ||||| | || || ||| Sbjct 147621 ACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGACACTATTGACAATGTCAAGTCT 147562 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 147561 AAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 147502 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || |||||| | || |||||| |||| || ||||| ||| | ||| Sbjct 147501 CAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTACAC 147442 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 147441 TTGGTTTTGAGA 147430 >seq30 Length=183202 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||| | ||||| ||| ||||||||| | || || || Sbjct 32208 ACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACAATGTCAAATCC 32267 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| || || ||| |||||| | ||||| || || ||| Sbjct 32268 AAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 32327 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || || ||| |||| |||||| | || || || || ||| | || Sbjct 32328 CAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACAT 32387 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 32388 TTAGTCTTGAGA 32399 >seq21 Length=122314 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 94194 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 94135 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || || |||||| | ||||| || || ||| Sbjct 94134 AAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAG 94075 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 94074 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 94015 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 94014 TTGGTCTTGAGA 94003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814940015427