Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 250 3e-61 seq13 114 2e-20 >seq6 Length=41729 Score = 250 bits (276), Expect = 3e-61 Identities = 867/1339 (65%), Gaps = 38/1339 (3%) Strand=Plus/Minus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 5781 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 5723 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 5722 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 5663 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 5662 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 5603 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 5602 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 5543 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 5542 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 5483 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 5482 ACACTGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 5424 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || ||||| | || || |||| | | ||||| ||| | Sbjct 5423 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 5364 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 5363 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 5305 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 5304 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 5246 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 5245 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 5186 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 5185 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 5129 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 5128 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 5069 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 5068 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 5009 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 5008 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 4949 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 4948 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 4889 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 4888 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 4829 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 4828 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 4769 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 4768 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 4709 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 4708 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 4649 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 4648 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 4590 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 4589 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 4531 Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560 || |||| |||||| |||||||| || || ||||| | ||||| |||||| Sbjct 4530 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 4475 Query 105561 ATAATGAATGCTTTGAACC 105579 |||||||||| || ||||| Sbjct 4474 ATAATGAATGTTTCGAACC 4456 >seq13 Length=149500 Score = 114 bits (126), Expect = 2e-20 Identities = 868/1376 (63%), Gaps = 54/1376 (4%) Strand=Plus/Minus Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296 ||||| ||||| | ||||| ||||| || || || ||||| || |||| || | Sbjct 46928 ATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAAT 46869 Query 104297 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 104355 |||||| ||| || |||| |||||| | ||||| | ||||| ||||||||||| Sbjct 46868 TTGATGTCGTTAAGATAC-TTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACACC 46810 Query 104356 AAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 104415 | || |||||||| || ||| | || |||| ||||| ||||| ||| | ||||| Sbjct 46809 ACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTAT 46750 Query 104416 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 104475 |||| ||| | | || ||||| || || || || || ||| |||| | || Sbjct 46749 TTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCA 46690 Query 104476 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 104535 ||| | | | | ||| ||| ||| || || || ||| ||| | || Sbjct 46689 TATCAACAACATCCGTTCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGG 46630 Query 104536 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCG 104595 | ||||| ||| |||| || || || || || || ||||| | || | || | Sbjct 46629 GTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTG---G 46573 Query 104596 TCGAAAGGGATCTATCGCAGTC-----TATCTT-GAGCCATGGCACGCGGATATCATGGA 104649 | ||| || || || || | |||| ||||||||||| || |||||| | || Sbjct 46572 TAACAAGAGACCTGGTGCCTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGA 46513 Query 104650 GTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCT 104708 || | || | | | || ||| | || || | |||| | ||| | ||| Sbjct 46512 CTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC-GTGCAAGAGATTTGTTCC 46454 Query 104709 CCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTC 104768 | ||||| ||||| || ||||| |||||||| | ||| | ||| ||| |||| || Sbjct 46453 CTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTT 46394 Query 104769 TCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 104828 | |||| || || || ||| | |||| |||||| || ||||||| | Sbjct 46393 TATTTTCACCCAGTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAAC 46334 Query 104829 TTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 104888 | || || ||||| ||||||||| | | || | ||| | ||| Sbjct 46333 TATATACTCGTTACGAAAGAGAAGGTCGTG---GTAAAACAATTAAAGCCCAAAAGTTGT 46277 Query 104889 GGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 || | || ||| | |||| | || || || || |||||||| | |||| |||| || ||| Sbjct 46276 GGTATGCCATTTTGCAAG-CACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGAC 46218 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || |||||| |||| || ||| |||| || ||| ||||| || || | ||| Sbjct 46217 GCATGTAACAGGAAGACAAACCAACAGAACTTAGGTACTATCAAATCATCTAACTTATGT 46158 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 |||||| | |||| | | | ||||| || || || ||||| | || || || Sbjct 46157 TGTGAAATCGTCGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATT 46098 Query 105068 GCTCTCCC--CA--AGTATGTGGATCCAGA----GACAAA-----GACATTTGATTATGA 105114 || || || || || || || | |||| | ||| | | | ||| || Sbjct 46097 GCCCTACCAGCATTCGT-TGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA 46039 Query 105115 AAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAA 105174 | | | ||||| || | ||| | || | ||| | ||||||||||| || | || Sbjct 46038 GAGATTGCACGAGATTGCTAAAGTCATTACTCACAACTTGAACAGAGTTATCGACCGTAA 45979 Query 105175 TTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 || || || ||| ||| ||| | || || ||||||| || | || |||| ||| Sbjct 45978 TTACTATCCAGTTCCCGAG---GCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCT 45922 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 ||||| ||||| | || ||| | || | | || | | ||||| || || || Sbjct 45921 TGGTGTCCAGGGCTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGA 45862 Query 105292 AGCGAAGGAAATC--AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349 ||| | || || || | || || || || || || ||||| ||||||| || Sbjct 45861 AGCTCA--AACTCTAAACAAACAAATCTTCGAAACTATTTACCACGCTACTCTTGAAGCC 45804 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 | || ||||| | || ||| |||| || ||||| |||||||||||||| Sbjct 45803 TCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTCTACTTTTGAAGGTTCTCCAGCTTC- 45745 Query 105410 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGG 105467 |||||| | | ||||| ||||||| |||| | | |||| || | || |||| Sbjct 45744 CAAGGGTATTTTACAATTCGATATGT-GGAACGCTAAACCATTTGGCATGTGGGATTGGG 45686 Query 105468 AAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 || | || ||| || | || | || | | |||| | | ||| | | ||||| Sbjct 45685 AAAC-CTTAAGAAAGGACATTGTTAA--ACATGGGT-TAAGAAACTCTTTGACTATGGCA 45630 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||||||||||| ||||| || | ||||| | ||| |||||||||| || ||||| Sbjct 45629 CCAATGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACC 45574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257978475880