Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq84 123 3e-23 seq214 122 1e-22 seq22 109 6e-19 >seq84 Length=143485 Score = 123 bits (136), Expect = 3e-23 Identities = 337/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248 ||||||| || ||| | ||||| ||||| ||| || || ||||||| |||| Sbjct 132583 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 132528 Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308 ||| |||| ||| | ||||| || ||||| | || || || || || || ||| Sbjct 132527 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 132468 Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 ||| || ||||| ||||| || |||||| | || |||||||| ||||| || || Sbjct 132467 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 132408 Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 || || ||||| || | || ||||||||| || |||||| | |||||| | ||| Sbjct 132407 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 132348 Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | || | || | ||| | | ||| | || || || ||||| | Sbjct 132347 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 132288 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || | | || ||| |||| |||||||||||||| || || ||||| |||| ||| Sbjct 132287 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 132228 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 ||| ||| | || | || ||| | | | | ||||| ||||| || ||||| | Sbjct 132227 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 132168 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667 || ||| |||| | | || ||| ||| | ||||| || || ||| | || |||| Sbjct 132167 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 132109 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 | ||||| |||||||| || || |||||| Sbjct 132108 CCCTGCTCTATGGATTCCCGATCTTTTCATG 132078 >seq214 Length=210230 Score = 122 bits (134), Expect = 1e-22 Identities = 335/508 (66%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||| | |||||| | ||||| |||||||| || | | || | || || || Sbjct 8024 TCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCTTTA-GAAACCTAT 7966 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||||||| | ||| |||||||| || ||| | ||||| | |||||||||||||| Sbjct 7965 AACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACTTTATTCAACGCTGGTACT 7906 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||||| ||||| ||| ||| | || || ||||||||||| || || || || Sbjct 7905 CCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGATTCCATTGAAGGT 7846 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| || | ||||| ||||| || || || | || ||||| ||| | Sbjct 7845 ATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGGAGGTATTGGTCTA 7786 Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 || | ||| | ||||| | |||| | || || || ||||| | | Sbjct 7785 CATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAACGGGACTTCTAAC 7726 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || | | |||||| |||| ||||||||||| || ||||| || || |||| |||||| Sbjct 7725 GGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGTTGACCAAGGTGGT 7666 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||| | || | || || | || | ||||| |||||||| || || | || Sbjct 7665 AACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGAC 7606 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670 || |||| | | |||||| ||| | ||||| || || ||| | || | || | Sbjct 7605 TTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCCC 7547 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||| ||| |||| || || |||||| Sbjct 7546 TGCTCTATGGGTTCCAGATCTTTTCATG 7519 >seq22 Length=276364 Score = 109 bits (120), Expect = 6e-19 Identities = 346/530 (65%), Gaps = 20/530 (4%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| ||||| || || || || | | || Sbjct 269674 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCC 269615 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || | |||||||||||| ||||||| |||||| || |||||| | Sbjct 269614 GGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAAC 269555 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925 ||||||| |||| |||||||| || | || ||||| | || || | ||| | Sbjct 269554 ACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTG-CGTCTTGGA 269496 Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCG----TTTGACCGCAGGGACAGTATCGATCGC 74980 |||| | | |||||||| | ||| ||| ||| | |||| || ||||| || Sbjct 269495 TCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTT-----CTGGGATGGTGTCGATGGC 269441 Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040 | ||| | | | | | || | |||||||||| | | || |||| | ||||| Sbjct 269440 GTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTA 269381 Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 || || |||||||| ||| | | ||| ||| | |||||||| | || || | Sbjct 269380 GGTTTCGGAATGAATGTTTTCGAT-AGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCG 269322 Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 ||||| || || | || |||||| | | | || || |||| || ||||| |||| Sbjct 269321 GGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGG 269262 Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216 ||||||| || || || || || ||| ||| | || | || | | | |||| Sbjct 269261 CGGCGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGT 269202 Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 ||| || | | ||| | |||||| || |||||| | ||||||||| Sbjct 269201 TCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAA 269152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213352842600