Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq196 98.7 7e-16
seq97 87.8 1e-12
seq30 84.2 2e-11
>seq196
Length=158208
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || |||||| |||| || |||
Sbjct 147648 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 147589
Query 27847 ACCGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| | | ||||| ||||| || || ||||| |||||| |||| |
Sbjct 147588 TCAGACACTATTGACAAT--GTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTG 147531
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || || |||||||| |||| | | ||||| || |
Sbjct 147530 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACT 147471
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| |||||| || ||||||||| | ||| | || ||
Sbjct 147470 ACAACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 147419
>seq97
Length=405077
Score = 87.8 bits (96), Expect = 1e-12
Identities = 94/124 (76%), Gaps = 8/124 (6%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| ||| || || |||| |||||||| || ||||| ||||
Sbjct 386876 GACAAGGAAGGTATTCCTCCGGATCAACAGAGGTTGATTTTTGCTGGTAAACAGCTGGAA 386935
Query 27943 GACG----AACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998
|||| ||||| |||| ||||||||||||||||| ||| |||| |||| |||||
Sbjct 386936 GACGGCAGAACGC----TGTCTGATTACAACATCCAAAAGGAGTCCACTCTGCACTTGGT 386991
Query 27999 TTTG 28002
|||
Sbjct 386992 CTTG 386995
>seq30
Length=183202
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||||||| | || || || ||| | || || ||||| || || ||||||||
Sbjct 32277 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 32336
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||||||||| |||||||| ||||| || |||||| ||||| || |||
Sbjct 32337 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 32396
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 32397 AGATTGAGAGGTGG 32410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860721552749
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |