Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq30 136 3e-27
seq82 120 2e-22
seq97 91.5 1e-13
>seq30
Length=183202
Score = 136 bits (150), Expect = 3e-27
Identities = 167/224 (75%), Gaps = 3/224 (1%)
Strand=Plus/Plus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
|||||||| || | || || ||||| |||||||| |||||||| || | ||||| ||
Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | ||| | || | || |||||||||||| | || || || ||||| | ||
Sbjct 32253 GACAATGTCAAATCCAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 32311
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| ||||| || || ||| ||||||||| | || || ||| |||||||| |||||
Sbjct 32312 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 32371
Query 23799 AGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
|| ||||| ||||||||||| || || ||| |||| || ||||
Sbjct 32372 GGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTATCA 32415
>seq82
Length=49194
Score = 120 bits (132), Expect = 2e-22
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678
||| || ||||| | || || || || |||||| | |||||||| || | ||||| |
Sbjct 41300 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41359
Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737
||| ||| | || |||| | || ||||| |||||| | || || || ||||| | |
Sbjct 41360 TGACAATGTCAAGTCAAAGA-TTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 41418
Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797
|||| ||||| || || ||| ||||||||| | || || || ||||| || ||||
Sbjct 41419 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 41478
Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
| || ||||| |||||||||||||| || ||| |||| || ||||
Sbjct 41479 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTATCA 41523
>seq97
Length=405077
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || || || || || || || | || || || || |
Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| |||||| | || || ||||||
Sbjct 386843 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 386902
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATTA 23786
||| | || || ||||| || ||||| |||||||||| ||||| | | |||||
Sbjct 386903 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCT----GATTA 386958
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| |||||||| | || || || || || || |||| ||
Sbjct 386959 CAACATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || || || || ||| | || || || ||| |
Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | |||| || || || ||||| || | || || || |||
Sbjct 387299 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387358
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || |||||||| || ||||||||||||| | ||||| || || |||
Sbjct 387359 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387418
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| ||||| |||||||| | || || || ||||
Sbjct 387419 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAG 387453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008005756596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |