Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq30 136 3e-27 seq82 120 2e-22 seq97 91.5 1e-13 >seq30 Length=183202 Score = 136 bits (150), Expect = 3e-27 Identities = 167/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 |||||||| || | || || ||||| |||||||| |||||||| || | ||||| || Sbjct 32193 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32252 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | ||| | || | || |||||||||||| | || || || ||||| | || Sbjct 32253 GACAATGTCAAATCCAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 32311 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || ||||| || || ||| ||||||||| | || || ||| |||||||| ||||| Sbjct 32312 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 32371 Query 23799 AGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 || ||||| ||||||||||| || || ||| |||| || |||| Sbjct 32372 GGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTATCA 32415 >seq82 Length=49194 Score = 120 bits (132), Expect = 2e-22 Identities = 164/225 (73%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 ||| || ||||| | || || || || |||||| | |||||||| || | ||||| | Sbjct 41300 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41359 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 ||| ||| | || |||| | || ||||| |||||| | || || || ||||| | | Sbjct 41360 TGACAATGTCAAGTCAAAGA-TTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 41418 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 |||| ||||| || || ||| ||||||||| | || || || ||||| || |||| Sbjct 41419 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 41478 Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 | || ||||| |||||||||||||| || ||| |||| || |||| Sbjct 41479 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTATCA 41523 >seq97 Length=405077 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || || || || || || || | || || || || | Sbjct 386783 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386842 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| |||||| | || || |||||| Sbjct 386843 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 386902 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATTA 23786 ||| | || || ||||| || ||||| |||||||||| ||||| | | ||||| Sbjct 386903 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCT----GATTA 386958 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| |||||||| | || || || || || || |||| || Sbjct 386959 CAACATCCAAAAGGAGTCCACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 387009 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || || ||| | || || || ||| | Sbjct 387239 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387298 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | |||| || || || ||||| || | || || || ||| Sbjct 387299 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387358 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || ||||||||||||| | ||||| || || ||| Sbjct 387359 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387418 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||| |||||||| | || || || |||| Sbjct 387419 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAG 387453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008005756596