Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq21 172 1e-37
seq196 167 5e-36
seq12 159 7e-34
seq30 158 3e-33
seq82 152 1e-31
seq97 150 4e-31
seq42 84.2 5e-11
>seq21
Length=122314
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| || || | || || ||
Sbjct 94010 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 94069
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||| ||| || ||||| ||||||||||||
Sbjct 94070 AATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGG 94129
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 94130 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 94189
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 94190 CCAGTCAAAGTCTTAACGAA 94209
>seq196
Length=158208
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| || ||||||||||||||||||| | || | ||| || ||
Sbjct 147437 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 147496
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| |||||||| |||||||||||
Sbjct 147497 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 147556
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || |||||||| |||| ||| ||||| || || || ||||||
Sbjct 147557 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 147616
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||| ||
Sbjct 147617 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 147648
Score = 91.5 bits (100), Expect = 3e-13
Identities = 168/244 (69%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|| |||||| | || ||| |||| ||| | | || || | ||||||||||| || |
Sbjct 13291 AACGAAGTCTAAGACAGAAGTGTCAGAGTGAGTACCATCAATATCATGCTCAACGTAGAC 13350
Query 317007 AGTTTTCAGAATATCCTT-CGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065
||| | | | | | ||| || ||||| || || | ||||| || |||| || ||||
Sbjct 13351 GGTTCT-ACATTCTTCTTGGGTTGGGAAACCATCAACTTGACCATTAGCAATAGCTCTCA 13409
Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125
||| || ||||| ||| ||| || || || || | |||||| | | | ||||||
Sbjct 13410 TCAAAGTGGACTTACCACAACCGTTTGGACCACAGATACCATATCTTCTAGCTCTCTTCA 13469
Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185
| || |||| ||||||| | |||||| |||| || |||| |||||| ||||| |
Sbjct 13470 ATCTCAATTGGGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAATTCACAGT 13529
Query 317186 CACA 317189
|||
Sbjct 13530 TACA 13533
>seq12
Length=130387
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
|| || ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 12075 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 12017
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 12016 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 11957
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 11956 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 11897
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 11896 CAAAGTCTTGACAAA 11882
>seq30
Length=183202
Score = 158 bits (174), Expect = 3e-33
Identities = 154/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | ||
Sbjct 32387 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 32329
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | |||||||||| || ||||| || |||||||| ||||
Sbjct 32328 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 32269
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
| | ||| || | || || ||||| |||| ||| ||||| |||||||| || ||||| |
Sbjct 32268 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTTTTACCAG 32209
Query 283075 TCAAAGTCTTAACGAA 283090
||||||||||||||||
Sbjct 32208 TCAAAGTCTTAACGAA 32193
>seq82
Length=49194
Score = 152 bits (168), Expect = 1e-31
Identities = 153/196 (78%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| |||||||| |||||||||| |||| || | || || || | ||
Sbjct 41495 ATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 41437
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || |||||||| || | |||||||||| |||||||| ||||||||||| ||||
Sbjct 41436 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCT 41377
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
||| || || | || || ||||| |||| ||| ||||| | |||||| |||||||| |
Sbjct 41376 TTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 41317
Query 283075 TCAAAGTCTTAACGAA 283090
||||||| || || ||
Sbjct 41316 TCAAAGTTTTGACAAA 41301
>seq97
Length=405077
Score = 150 bits (166), Expect = 4e-31
Identities = 148/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||| ||||| | | || | |||||||| ||||| || || |||||
Sbjct 386745 TCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAA 386686
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| |
Sbjct 386685 ATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 386626
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| || | ||||| || | ||| || |||||||| ||||||||||| |||
Sbjct 386625 TCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACG 386566
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 386565 AAAATCTGCAT 386555
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| |||||||||||||| |||| ||||| | ||| || || || ||||| || |||||
Sbjct 386973 TCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAA 386914
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||||| || |||||||| ||||||||||| ||||| | || ||| |
Sbjct 386913 ATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 386854
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| |||| ||||| || | || || |||||||| |||| ||||| |||
Sbjct 386853 TCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACG 386794
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 386793 AAGATTTGCAT 386783
Score = 138 bits (152), Expect = 2e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||| ||||| | | || | |||||||| ||||| || || |||||
Sbjct 387201 TCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAA 387142
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| |
Sbjct 387141 ATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 387082
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| |||| ||||| || | || || |||||||| |||| ||||| |||
Sbjct 387081 TCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACG 387022
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 387021 AAGATTTGCAT 387011
>seq42
Length=38796
Score = 84.2 bits (92), Expect = 5e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | ||||| || ||| || | ||| || || || || ||||||
Sbjct 21284 GTGGGGAAGCCGTCAACTTGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCA 21343
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
||||| || || || |||||||||| | ||| | |||| | | | || |||||
Sbjct 21344 CCATTAGGCCCACATAGACCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTT 21403
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACA 317189
|| | ||||| |||||||||||| ||| |||||||| | |||
Sbjct 21404 AGCAAGATCTTGGCACCATATGCCAAAGAAAACTCACAGTTACA 21447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046734009809098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |