Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016- 01-13] 387 sequences; 14,343,437 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq21 172 1e-37 seq196 167 5e-36 seq12 159 7e-34 seq30 158 3e-33 seq82 152 1e-31 seq97 150 4e-31 seq42 84.2 5e-11 >seq21 Length=122314 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| ||| ||| ||||||||||||||||||| || || | || || || Sbjct 94010 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 94069 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||| ||| || ||||| |||||||||||| Sbjct 94070 AATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGG 94129 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| | |||||| |||||| Sbjct 94130 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 94189 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || ||||||||||||||||| Sbjct 94190 CCAGTCAAAGTCTTAACGAA 94209 >seq196 Length=158208 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||||| | || | ||| || || Sbjct 147437 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 147496 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| |||||||| ||||||||||| Sbjct 147497 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 147556 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || |||||||| |||| ||| ||||| || || || |||||| Sbjct 147557 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 147616 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || ||||| || Sbjct 147617 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 147648 Score = 91.5 bits (100), Expect = 3e-13 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || |||||| | || ||| |||| ||| | | || || | ||||||||||| || | Sbjct 13291 AACGAAGTCTAAGACAGAAGTGTCAGAGTGAGTACCATCAATATCATGCTCAACGTAGAC 13350 Query 317007 AGTTTTCAGAATATCCTT-CGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 ||| | | | | | ||| || ||||| || || | ||||| || |||| || |||| Sbjct 13351 GGTTCT-ACATTCTTCTTGGGTTGGGAAACCATCAACTTGACCATTAGCAATAGCTCTCA 13409 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| ||| ||| || || || || | |||||| | | | |||||| Sbjct 13410 TCAAAGTGGACTTACCACAACCGTTTGGACCACAGATACCATATCTTCTAGCTCTCTTCA 13469 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || |||| ||||||| | |||||| |||| || |||| |||||| ||||| | Sbjct 13470 ATCTCAATTGGGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAATTCACAGT 13529 Query 317186 CACA 317189 ||| Sbjct 13530 TACA 13533 >seq12 Length=130387 Score = 159 bits (176), Expect = 7e-34 Identities = 154/195 (79%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955 || || ||| ||||||||| ||||||||||||| |||| || | || || || | ||| Sbjct 12075 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 12017 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 || || ||||||||||| | |||||||||| || ||||| ||||||||||| ||||| Sbjct 12016 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 11957 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || || || | || |||||||| |||| ||| ||||| | |||||| |||||||| || Sbjct 11956 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 11897 Query 283076 CAAAGTCTTAACGAA 283090 ||||||||| || || Sbjct 11896 CAAAGTCTTGACAAA 11882 >seq30 Length=183202 Score = 158 bits (174), Expect = 3e-33 Identities = 154/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | || Sbjct 32387 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 32329 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || ||||||||||| | |||||||||| || ||||| || |||||||| |||| Sbjct 32328 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 32269 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 | | ||| || | || || ||||| |||| ||| ||||| |||||||| || ||||| | Sbjct 32268 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTTTTACCAG 32209 Query 283075 TCAAAGTCTTAACGAA 283090 |||||||||||||||| Sbjct 32208 TCAAAGTCTTAACGAA 32193 >seq82 Length=49194 Score = 152 bits (168), Expect = 1e-31 Identities = 153/196 (78%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| |||||||| |||||||||| |||| || | || || || | || Sbjct 41495 ATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 41437 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || |||||||| || | |||||||||| |||||||| ||||||||||| |||| Sbjct 41436 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCT 41377 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 ||| || || | || || ||||| |||| ||| ||||| | |||||| |||||||| | Sbjct 41376 TTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 41317 Query 283075 TCAAAGTCTTAACGAA 283090 ||||||| || || || Sbjct 41316 TCAAAGTTTTGACAAA 41301 >seq97 Length=405077 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| ||||| | | || | |||||||| ||||| || || ||||| Sbjct 386745 TCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAA 386686 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 386685 ATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 386626 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||||| || | ||| || |||||||| ||||||||||| ||| Sbjct 386625 TCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACG 386566 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 386565 AAAATCTGCAT 386555 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| |||| ||||| | ||| || || || ||||| || ||||| Sbjct 386973 TCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAA 386914 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||| || |||||||| ||||||||||| ||||| | || ||| | Sbjct 386913 ATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 386854 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| |||| ||||| || | || || |||||||| |||| ||||| ||| Sbjct 386853 TCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACG 386794 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 386793 AAGATTTGCAT 386783 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| ||||| | | || | |||||||| ||||| || || ||||| Sbjct 387201 TCCTTTTGGATGTTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAA 387142 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 387141 ATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 387082 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| |||| ||||| || | || || |||||||| |||| ||||| ||| Sbjct 387081 TCGATGGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACG 387022 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 387021 AAGATTTGCAT 387011 >seq42 Length=38796 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | ||||| || ||| || | ||| || || || || |||||| Sbjct 21284 GTGGGGAAGCCGTCAACTTGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCA 21343 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 ||||| || || || |||||||||| | ||| | |||| | | | || ||||| Sbjct 21344 CCATTAGGCCCACATAGACCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTT 21403 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACA 317189 || | ||||| |||||||||||| ||| |||||||| | ||| Sbjct 21404 AGCAAGATCTTGGCACCATATGCCAAAGAAAACTCACAGTTACA 21447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734009809098