Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001515465.1_202016-
01-13] 387 sequences; 14,343,437 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq97 147 2e-30
seq196 109 4e-19
seq21 100 2e-16
>seq97
Length=405077
Score = 147 bits (162), Expect = 2e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||||||||||||| |||| ||| || ||| ||||||||||||||||||
Sbjct 387016 TTGCATACCACCTCTCAGTCTCAAGACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTA 386957
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| |||||||| || || ||||| ||||| | ||| |||||
Sbjct 386956 ATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATC 386897
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| ||| | ||||||||| || ||||| ||| | | | |||||||| | ||
Sbjct 386896 CGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGA 386837
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 386836 CTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386783
Score = 123 bits (136), Expect = 2e-23
Identities = 184/258 (71%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||||||||||||| |||| |||||| || ||||||||||||||| ||
Sbjct 386788 TTGCATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATA 386729
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | |||| | | || ||||| ||||| || ||||| |||| | || ||
Sbjct 386728 GTCTGACAAAGTT--CTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGG 386671
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | ||||||||| || ||||| ||| | | | || ||||||| |
Sbjct 386670 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAG 386611
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || ||||||| ||||| ||||| || || | ||||| ||||| || ||||| ||
Sbjct 386610 GACTCGACCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATAGTG 386551
Query 44342 --TGAATGAAAATAGCGG 44357
| | | |||| |||||
Sbjct 386550 TCTTATTTAAAAAAGCGG 386533
Score = 122 bits (134), Expect = 6e-23
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||||||||| |||| |||||| || ||||||||||||||| || ||
Sbjct 387241 CATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC 387182
Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| | ||| | | || ||||| ||||| || ||||| |||| | || || |||
Sbjct 387181 TGACAAAGTT--CTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCT 387124
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||||||||| || ||||| ||| | | | |||||||| | ||
Sbjct 387123 GGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGAC 387064
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 387063 TCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 387011
>seq196
Length=158208
Score = 109 bits (120), Expect = 4e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| ||||||| |||||| |||| ||| | ||| |||||||||||||||||| || | |
Sbjct 147419 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 147478
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
| | || |||| |||| ||||| || ||||||||||| | || || || | ||
Sbjct 147479 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 147537
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287
| ||||||||| || ||||| ||| || ||| | || ||||| | |||||
Sbjct 147538 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATAGTGTCTGAAGATTCA 147595
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 147596 ACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 147645
>seq21
Length=122314
Score = 100 bits (110), Expect = 2e-16
Identities = 160/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | |||||| |||| || | ||| ||||||||||||||||| ||
Sbjct 93989 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 94048
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| ||||| || ||||||||||| | || ||||| |
Sbjct 94049 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAG 94106
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 94107 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 94164
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||| || |||| || || ||||| || || | ||||| ||||||
Sbjct 94165 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 94210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988702082779
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |