Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq111 116 3e-21
seq61 96.9 3e-15
seq58 87.8 2e-12
seq147 86.0 5e-12
seq41 84.2 2e-11
>seq111
Length=63476
Score = 116 bits (128), Expect = 3e-21
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || |||| || || || |||| |||| ||||||||||||||||||||||||||||
Sbjct 63251 TTGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCC 63310
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| || ||| | |||| ||||| || || || ||| |||| | ||||| ||||||
Sbjct 63311 GACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGA 63370
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | ||| || || || ||||| || || | | ||| || || || |||
Sbjct 63371 GGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCG 63430
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATAT 21169
|||| ||||||||||| |||||||| || ||||| || ||
Sbjct 63431 ACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAAT 63474
>seq61
Length=97283
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || ||||||||||||||||| ||||| ||||| | |
Sbjct 94336 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 94395
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | |||| |||| || || || ||| | || | ||| || ||||| ||
Sbjct 94396 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 94455
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | | | ||| || | || |
Sbjct 94456 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 94515
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | |||||| ||||| |||||||| || ||||| || |||||||| |||
Sbjct 94516 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 94566
>seq58
Length=101919
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || | ||| || |||||||| ||||| ||||| | |
Sbjct 8624 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8565
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| || || || ||| | || | ||| || ||||| ||
Sbjct 8564 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8505
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | ||| ||| | || |
Sbjct 8504 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8445
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| |||||| ||||| |||||||| || ||||| || |||||||| |||
Sbjct 8444 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 8394
>seq147
Length=47883
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | ||||| |||||| || ||||| || ||||||||||| || | |
Sbjct 15809 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 15868
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| |||| ||||| || || || ||| |||| | ||| || || || ||
Sbjct 15869 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 15928
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| || || ||| || | | | | ||| || | ||
Sbjct 15929 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 15988
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || ||||| || |||| |||||||| || ||||||||
Sbjct 15989 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16035
>seq41
Length=123922
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
||||||||||| || ||||||||||| ||||| | || |||| |||| |||| ||
Sbjct 80831 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGC 80890
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || ||| | || | ||| || ||||| || | ||||||||||| ||||||
Sbjct 80891 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 80950
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
|| || | | | | ||| ||| | || ||||| || |||||||| || ||
Sbjct 80951 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 81010
Query 21153 AACGTTTTGACAAA 21166
|| || ||||||||
Sbjct 81011 AAAGTCTTGACAAA 81024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422253549380168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |