Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq77 168 5e-37
seq3 123 2e-23
>seq77
Length=84601
Score = 168 bits (186), Expect = 5e-37
Identities = 373/560 (67%), Gaps = 31/560 (6%)
Strand=Plus/Minus
Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055
|| ||||||| | ||||| || || ||| ||| || | || ||| | | ||||||||
Sbjct 56433 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAAT 56374
Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115
||| | ||||| || ||||| || ||||| ||||| || || || || | | ||
Sbjct 56373 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 56314
Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175
|| | || ||||| | ||| || | || ||| ||||||||||| || || ||
Sbjct 56313 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCC 56254
Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218
| ||||||||| || | ||| || || || ||||| |
Sbjct 56253 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 56194
Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268
|| ||| || || ||||| ||||| || | ||| || || ||||| ||
Sbjct 56193 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGC 56134
Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328
|||||| || ||| ||||| |||| ||| | |||||||||||| || ||
Sbjct 56133 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 56074
Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388
||| | || ||| ||| | ||| || |||||||||| |||| |||| ||| | ||
Sbjct 56073 TGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 56015
Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446
| | || |||| |||| || ||||||||||||||||| ||||||||||| || ||
Sbjct 56014 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 55956
Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506
|| |||||| ||| ||||| ||| || | |||||||||||| | |||||||||
Sbjct 55955 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 55896
Query 97507 GCATCCCAAATGTGCACACC 97526
| |||||||| | |||||
Sbjct 55895 CCGTCCCAAATCTTAACACC 55876
>seq3
Length=317965
Score = 123 bits (136), Expect = 2e-23
Identities = 412/640 (64%), Gaps = 41/640 (6%)
Strand=Plus/Plus
Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCT---TTAAA 96968
||||| || || |||| ||| || |||| ||| ||| | || | || |||||
Sbjct 210017 CATTTGGATTCTTGGGTGAGGATTGTAGTCTTC---AATTTCGAAATCTTCTAACTTAAA 210073
Query 96969 ATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG 97028
|||||||| || ||| | || || ||||| | | ||||| || || ||| ||
Sbjct 210074 GTCATCAATTTCTGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCTTGGATCTCT 210133
Query 97029 CGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGT 97088
| || || || | | |||||||| |||| | ||| | || ||||| || |||||
Sbjct 210134 TGAAATTTGTTCATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGT 210193
Query 97089 GTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGA 97148
||||| || || || || | | |||| ||| | || ||||| | ||| | ||| |
Sbjct 210194 ATGAATGAACTCACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGC 210253
Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208
||| || || ||||| ||||| || || ||||||||| || | ||| || | |
Sbjct 210254 ATATGAGGCGATATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAA 210313
Query 97209 ACAGGAAAG-------------CTT-----TCCATC---------ACACACATAAAACTG 97241
|| ||||| ||| ||| || || |||||||| ||
Sbjct 210314 GCACGAAAGGCGAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTG 210373
Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301
|| | || || || || || ||||| || || |||| |||||||| |
Sbjct 210374 TGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCT 210433
Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361
||| | ||||||||||| |||||||| | || | | || | |||||| | ||
Sbjct 210434 CATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTG 210493
Query 97362 ATCAACGCCTTCTCCACCATA---ATTGT-GCTTAAGACCTTGATATTCTGCTCCAAAAT 97417
||| | |||| ||| ||| || || || || |||| |||| || |||||||
Sbjct 210494 ATCGATACCTTGTCCGGTATAGTCATCGTCGC---AGGTCTTG-TATTTGGCACCAAAAT 210549
Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477
| ||||||||||| ||||||||||| || || || ||| ||| ||||| || || |
Sbjct 210550 GTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCATGAGTCCCA 210609
Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517
||| || ||||| | ||||||||| | ||||||||
Sbjct 210610 TCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAAT 210649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346779359379860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |