Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq147 107 2e-18
seq155 82.4 7e-11
>seq147
Length=47883
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||||||||||| | ||||| || || ||||||||||||||
Sbjct 16035 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 16094
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || ||||| || || || |||| | | || ||||| ||||
Sbjct 16095 ACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAG 16154
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| ||||| | |||| ||| || | || |
Sbjct 16155 GGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 16214
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | ||||| ||||||| ||| || ||||| ||||||||
Sbjct 16215 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16263
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct 16263 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 16322
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || | ||| || || || |||| | | || ||||| ||||
Sbjct 16323 ACAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAG 16382
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| ||||| | |||| ||| || | || |
Sbjct 16383 GGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 16442
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | ||||| ||||||| ||| || || |||||||||||
Sbjct 16443 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16491
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||||||||| || | ||||||||||| |||||||| |||||
Sbjct 15807 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 15866
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || || || || || || | || | | || ||||| ||||
Sbjct 15867 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 15926
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| ||| || | || | ||||| | || |
Sbjct 15927 GAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 15986
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || || || |||||||| || ||||| |||||
Sbjct 15987 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16035
>seq155
Length=44513
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914
||| || | ||||| ||||| ||||||| || ||||| || ||| || || |
Sbjct 43593 GAAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCC 43534
Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974
|| || | |||| | | || |||||||||| |||| || |||||| |||||
Sbjct 43533 ATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATC 43474
Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTG 45009
| |||||||||||| |||||||| ||||||||||
Sbjct 43473 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTG 43439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433824594535816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |