Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq77 131 3e-25
seq166 129 1e-24
seq155 122 2e-22
seq49 84.2 4e-11
>seq77
Length=84601
Score = 131 bits (144), Expect = 3e-25
Identities = 231/335 (69%), Gaps = 20/335 (6%)
Strand=Plus/Plus
Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353
|||||||||| || |||| | || ||| | || | || ||| ||| |||||| ||
Sbjct 55847 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 55905
Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413
|| |||| ||| || | | ||||| | ||||| || |||||| |||| |||||
Sbjct 55906 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 55965
Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473
|| ||||| |||||| | |||||||||||| |||| | || || | ||| ||||||
Sbjct 55966 TATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 56025
Query 35474 GGAAAGGGTATTGATCAATTG-GCCA--------ATATACTAAAGACCCTGAGAGAAAAT 35524
||| | ||||||||||||||| || ||| ||||||||| ||||
Sbjct 56026 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTAAAGAC---------AAAT 56076
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | |||||||| || ||||||| || ||||| || ||| || || ||||||
Sbjct 56077 CCCTACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCT 56136
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| || |||||||| || | | || || |||||
Sbjct 56137 TTGCCGCCATGCCATATTTTTTCACAGTTCTATGT 56171
>seq166
Length=41989
Score = 129 bits (142), Expect = 1e-24
Identities = 298/444 (67%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 7050 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 6991
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 6990 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 6931
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||||| || |||| | |||| || | |
Sbjct 6930 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 6878
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| |||||||||| || || || |||||||||| ||
Sbjct 6877 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 6818
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| | || | || ||| || | || |||||| | || |||| ||| ||
Sbjct 6817 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 6758
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| |||| || || || || | ||| ||||||| | || || ||||| |||| ||
Sbjct 6757 CGTTGAGTTCGTCGCCGACAGACTGTTGGTTGCTTTCGGTAACAAGAAA--TACTACAAG 6700
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| ||||||||| |||||||| || || ||| | | |||||| ||||| ||
Sbjct 6699 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 6640
Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 6639 GAAAAGAGAGTTTCTGACTACCAA 6616
>seq155
Length=44513
Score = 122 bits (134), Expect = 2e-22
Identities = 271/402 (67%), Gaps = 15/402 (4%)
Strand=Plus/Minus
Query 101960 TTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAAT 102019
||||| ||||| |||||| | ||||| || ||||| |||| || | |||| ||||||
Sbjct 43542 TTCGCCTCCATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAAC 43483
Query 102020 GAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAG 102079
||||| || | || ||||||||| | || ||||||||| || || |||| |
Sbjct 43482 GAGTTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCA- 43424
Query 102080 GGTTTTGTTGATA---CCCCATCAAGAGAAAGGATTCTTGAAATT-GTCACTGAAGCCGT 102135
|||| || || | | || | | || |||| | ||||| || |||||
Sbjct 43423 ---TTTGAAGAACAAGCCGGACCCAGCCATCG---TCGAGAAAATCGTCACCGAGGCCGT 43370
Query 102136 CCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTG 102195
| || |||||| || || || || |||| || || | || |||||
Sbjct 43369 CGAGATCGAACAAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGC 43310
Query 102196 CAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--A 102253
| | ||||||| ||||||| | || || || ||||| | ||| ||||| | | || |
Sbjct 43309 CGACTTGATGAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCGCCTTCGGTAA 43250
Query 102254 CTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAG 102313
| |||| | |||| || || |||||||||| |||||||| || |||||| | |
Sbjct 43249 CAAGAA--GTACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCC 43192
Query 102314 AATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
|||||||||||| || |||||||||||| |||| || |||
Sbjct 43191 GGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGACTACCAA 43150
>seq49
Length=112061
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| || ||||||||||| || || || ||| || | ||| || |||||||| ||||||
Sbjct 30998 CCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATG 31057
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910
|| || | | | | | ||||| || || || | ||| || |||| | || ||
Sbjct 31058 GAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGC-GTACCGGC 31116
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|||||| |||||||||||||| ||||| || || | |||||| | | || || |
Sbjct 31117 ATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTT 31176
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018
| || || | ||| || |||||||| || | |||||||||||
Sbjct 31177 CAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCAT 31224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989570078408590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |