Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq155 96.9 2e-15 >seq155 Length=44513 Score = 96.9 bits (106), Expect = 2e-15 Identities = 270/412 (66%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| ||| | | ||||| || | || || ||||| || || |||| |||||| || Sbjct 43581 GCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTG 43522 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| | | ||||| |||||| | || |||||||||||||| || | |||||| Sbjct 43521 AAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAA 43462 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||| | ||| |||||||| ||| || |||| || || ||||| ||| | Sbjct 43461 GGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCATTTGAAGAACAAGCCGGACCCA 43402 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 | | | | ||||| | | || ||||| || || || | ||||| ||| Sbjct 43401 GCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGAC 43342 Query 22990 GCACT-AAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTT 23048 || | || | || | || ||||||||| ||| |||| | |||| | |||| Sbjct 43341 GCCTTGCCAGTC-GCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGTCGAGTT 43283 Query 23049 TGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCC 23108 || ||||| | ||| | | ||| | ||| | ||| || || || | ||| || Sbjct 43282 CGTCGCAGACAGACTGTTGGTCGCCTTCGGTAACAAGAAGTACTACAAGGTCGACAACCC 43223 Query 23109 ATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 || ||||||||||| |||||| | | | ||||| || |||||||| ||| Sbjct 43222 CTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAA 43171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356228832926494