Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq166 170 2e-37
seq155 107 2e-18
>seq166
Length=41989
Score = 170 bits (188), Expect = 2e-37
Identities = 560/857 (65%), Gaps = 39/857 (5%)
Strand=Plus/Plus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| ||||| || ||||| || ||
Sbjct 6596 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 6655
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || |||||||| |||||||| || |||| ||| | |||||||| ||
Sbjct 6656 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 6714
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | |||| |||||| || || ||||| | ||| || |||||||| ||
Sbjct 6715 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 6774
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 6775 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 6831
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | || | || || |||| | |
Sbjct 6832 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCA 6887
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||||| || | |
Sbjct 6888 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 6947
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| ||||| |||| ||| ||||| | |||| ||||| | ||| || || | ||||
Sbjct 6948 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 7007
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || ||||| | ||||||| | ||||| || | | ||||||||| ||
Sbjct 7008 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 7067
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 7068 -AGGCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTC 7122
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||| ||| ||| || || ||
Sbjct 7123 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGT 7182
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| || ||||||||||| ||| ||||||||||| ||
Sbjct 7183 ATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTA 7242
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | || ||||||| | | || |||| | |||||||| ||
Sbjct 7243 GAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 7302
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---ttttt 13602
||| || |||||| ||| || ||||| ||||| | || | | |||| | ||
Sbjct 7303 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTT 7362
Query 13603 ttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCA 13660
||||| ||||| || ||| || | | ||| || || ||||| | || |||
Sbjct 7363 CTCGTTCATTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCA 7417
Query 13661 ACGGTCCAAAAAGAAGC 13677
||||||| ||||||||
Sbjct 7418 GCGGTCCAGAAAGAAGC 7434
>seq155
Length=44513
Score = 107 bits (118), Expect = 2e-18
Identities = 534/837 (64%), Gaps = 35/837 (4%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| ||||| || ||||| || || || | || ||||| |||
Sbjct 43148 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 43207
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAGTAA 12978
||||| |||||||| || || | ||| | ||||| || || || || | | ||
Sbjct 43208 TCCATGAAATCGAAGGGGTTGT-CGACCTTGTAGTACTTCTTGTTACCGAAGGCGACCAA 43266
Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038
|| |||||| || || ||||| | |||||| ||||| || || ||||| |||| ||
Sbjct 43267 CAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGCAA 43326
Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098
|| |||| || ||| || | ||| ||| || || || || ||| | || ||
Sbjct 43327 GGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGACGAT 43386
Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATT--TGAT-AGATGCTTAAACATCATACATGC 13155
| ||| ||| | || || || | | | ||| |||| || ||| ||
Sbjct 43387 TT-TCTCG--ACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGC 43443
Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215
||| || |||||| ||||| ||||| | || | |||||| || || || | || ||
Sbjct 43444 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGG 43503
Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275
||| | |||| || || | ||| || || | || || || || || || || | ||
Sbjct 43504 CATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACC 43563
Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-ATCC 13334
||| | | || || || | | |||||||| || | | | ||| ||||
Sbjct 43564 TTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAG-CGCGTCTGCGTCTTGGATCC 43622
Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAG--TTC----ATATTTTCTATTGCGT 13388
| | |||||| | || || | |||| ||| || | || || ||||
Sbjct 43623 ATCTAAGGGCCCATTCGGCCTTCT------CGCAAATTTCTGGGATGGTGTCGATGGCGT 43676
Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448
| || || | | ||||||| || || || ||||| ||||| ||| ||
Sbjct 43677 TGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGG 43736
Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508
|||| |||||||| ||||| || || ||||||||||| || |||| | || || | |
Sbjct 43737 TTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGA 43796
Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
||| || |||| | | || | || | ||||||||||| || || ||||| || |
Sbjct 43797 TCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGG 43856
Query 13569 CaaaaaaaGCAAGTA----TGTGCTTAATAAAtttt--ttttCGTT--TTCTGACAACTT 13620
| || || ||||| | || | | || || ||| |||||||| ||||| ||
Sbjct 43857 CGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTG-----TT 43911
Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677
||| || | | ||| || || ||||| | ||||| | ||||| ||||| ||
Sbjct 43912 GTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGC 43968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430976632647396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |